G949044


Basic Information

Item Value
gene id G949044
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 17232801 ~ 17233502 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1082159
ccagttagtgaaacataatgcctgttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataatgcctgttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataatgtatgttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataatgtctgttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataatgccagttagtgaaacataataccagttagtgaaacataataccagttagtgaaacataatgcc

Function

NR:

description
hypothetical protein EH28_02753

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1082159 True 702 lncRNA 0.32 1 17232801 17233502

Neighbor

gene id symbol gene type direction distance location
mllt10 mllt10 coding upstream 21008 17128427 ~ 17211793 (+)
pip4k2aa LOC106578380 coding upstream 123889 17065884 ~ 17108912 (+)
LOC118937438 NA coding upstream 235690 16995961 ~ 16997111 (+)
LOC110535399 LOC106590523 coding upstream 256270 16961687 ~ 16976531 (+)
LOC110536565 LOC106578374 coding upstream 275737 16902365 ~ 16957064 (+)
bmi1a LOC106578384 coding downstream 21153 17254655 ~ 17271169 (+)
spag6 spag6 coding downstream 47905 17281407 ~ 17285569 (+)
LOC110536567 pkd1l1 coding downstream 56120 17289622 ~ 17342631 (+)
LOC110535409 LOC106578385 coding downstream 109289 17342791 ~ 17352441 (+)
ezh2 ezh2 coding downstream 123204 17356706 ~ 17369209 (+)
G949042 NA non-coding upstream 2370 17230136 ~ 17230431 (+)
G949033 NA non-coding upstream 15930 17216641 ~ 17216871 (+)
G948814 NA non-coding upstream 74149 16958192 ~ 17158652 (+)
G949087 NA non-coding downstream 79549 17313051 ~ 17313273 (+)
G949103 NA non-coding downstream 122516 17356018 ~ 17356404 (+)
G949105 NA non-coding downstream 125635 17359137 ~ 17359378 (+)
G948710 NA other upstream 630909 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 687512 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 897509 16327393 ~ 16338373 (+)
G948587 NA other upstream 906394 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 1021961 16209929 ~ 16211192 (+)
G951511 NA other downstream 1893163 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 2527763 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 5493051 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 6431786 23665288 ~ 23665930 (+)
G956797 NA other downstream 6542270 23775772 ~ 23776845 (+)

Expression


Co-expression Network