Gene
RNA
| Item | Value |
|---|---|
| gene id | G949087 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17313051 ~ 17313273 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1082203 | True | 223 | lncRNA | 0.40 | 1 | 17313051 | 17313273 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| spag6 | spag6 | coding | upstream | 27482 | 17281407 ~ 17285569 (+) |
| bmi1a | LOC106578384 | coding | upstream | 41882 | 17254655 ~ 17271169 (+) |
| mllt10 | mllt10 | coding | upstream | 101258 | 17128427 ~ 17211793 (+) |
| pip4k2aa | LOC106578380 | coding | upstream | 204139 | 17065884 ~ 17108912 (+) |
| LOC118937438 | NA | coding | upstream | 315940 | 16995961 ~ 16997111 (+) |
| LOC110535409 | LOC106578385 | coding | downstream | 29518 | 17342791 ~ 17352441 (+) |
| ezh2 | ezh2 | coding | downstream | 43433 | 17356706 ~ 17369209 (+) |
| LOC118937326 | NA | coding | downstream | 72732 | 17386005 ~ 17391059 (+) |
| LOC110535414 | NA | coding | downstream | 130995 | 17444268 ~ 17537220 (+) |
| tpk1 | NA | coding | downstream | 396414 | 17709687 ~ 17789321 (+) |
| G949044 | NA | non-coding | upstream | 79549 | 17232801 ~ 17233502 (+) |
| G949042 | NA | non-coding | upstream | 82620 | 17230136 ~ 17230431 (+) |
| G949033 | NA | non-coding | upstream | 96180 | 17216641 ~ 17216871 (+) |
| G948793 | NA | non-coding | upstream | 270111 | 17036671 ~ 17042940 (+) |
| G949103 | NA | non-coding | downstream | 42745 | 17356018 ~ 17356404 (+) |
| G949105 | NA | non-coding | downstream | 45864 | 17359137 ~ 17359378 (+) |
| G949111 | NA | non-coding | downstream | 73862 | 17387135 ~ 17387367 (+) |
| G949120 | NA | non-coding | downstream | 90079 | 17403352 ~ 17403588 (+) |
| G949136 | LOC106578389 | non-coding | downstream | 115217 | 17428490 ~ 17459732 (+) |
| G948710 | NA | other | upstream | 711159 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 767762 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 977759 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 986644 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1102211 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1813392 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2447992 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5413280 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6352015 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6462499 | 23775772 ~ 23776845 (+) |
