G949103


Basic Information

Item Value
gene id G949103
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 17356018 ~ 17356404 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1082232
attttttttaacttaagTACGTTACATGgctggcagtgggagaagatgcaatgagatggattttggccgattTTCTGCTTATCTTCTTATCGATGAAACaattgatctcaatacagttctgttcccaaaactaaaatatgctatgaacagagtggacaaaattttgtagactttacattttgctaaagttttttttttaagtgcatTGTTTAGGAGTGCAAATGCGATTTTAGTTCATGCGCACACCCACTtcacagttaaataaaggttaaatatatttttataaaatgcacacgcgcacttcaaactaggcgttccctaacggaaatatgagccaataggatctcgctagctcgtgcttggctctgcccacctccttgctagTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1082232 True 387 lncRNA 0.37 1 17356018 17356404

Neighbor

gene id symbol gene type direction distance location
LOC110535409 LOC106578385 coding upstream 3577 17342791 ~ 17352441 (+)
LOC110536567 pkd1l1 coding upstream 13387 17289622 ~ 17342631 (+)
spag6 spag6 coding upstream 70449 17281407 ~ 17285569 (+)
bmi1a LOC106578384 coding upstream 84849 17254655 ~ 17271169 (+)
mllt10 mllt10 coding upstream 144225 17128427 ~ 17211793 (+)
ezh2 ezh2 coding downstream 302 17356706 ~ 17369209 (+)
LOC118937326 NA coding downstream 29601 17386005 ~ 17391059 (+)
LOC110535414 NA coding downstream 87864 17444268 ~ 17537220 (+)
tpk1 NA coding downstream 353283 17709687 ~ 17789321 (+)
pign pign coding downstream 570230 17926634 ~ 17945204 (+)
G949087 NA non-coding upstream 42745 17313051 ~ 17313273 (+)
G949044 NA non-coding upstream 122516 17232801 ~ 17233502 (+)
G949042 NA non-coding upstream 125587 17230136 ~ 17230431 (+)
G949105 NA non-coding downstream 2733 17359137 ~ 17359378 (+)
G949111 NA non-coding downstream 30731 17387135 ~ 17387367 (+)
G949120 NA non-coding downstream 46948 17403352 ~ 17403588 (+)
G949136 LOC106578389 non-coding downstream 72086 17428490 ~ 17459732 (+)
G949183 NA non-coding downstream 157417 17513821 ~ 17520003 (+)
G948710 NA other upstream 754126 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 810729 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 1020726 16327393 ~ 16338373 (+)
G948587 NA other upstream 1029611 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 1145178 16209929 ~ 16211192 (+)
G951511 NA other downstream 1770261 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 2404861 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 5370149 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 6308884 23665288 ~ 23665930 (+)
G956797 NA other downstream 6419368 23775772 ~ 23776845 (+)

Expression


Co-expression Network