Gene
RNA
| Item | Value |
|---|---|
| gene id | G949105 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17359137 ~ 17359378 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1082234 | True | 242 | lncRNA | 0.43 | 1 | 17359137 | 17359378 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535409 | LOC106578385 | coding | upstream | 6696 | 17342791 ~ 17352441 (+) |
| LOC110536567 | pkd1l1 | coding | upstream | 16506 | 17289622 ~ 17342631 (+) |
| spag6 | spag6 | coding | upstream | 73568 | 17281407 ~ 17285569 (+) |
| bmi1a | LOC106578384 | coding | upstream | 87968 | 17254655 ~ 17271169 (+) |
| mllt10 | mllt10 | coding | upstream | 147344 | 17128427 ~ 17211793 (+) |
| LOC118937326 | NA | coding | downstream | 26627 | 17386005 ~ 17391059 (+) |
| LOC110535414 | NA | coding | downstream | 84890 | 17444268 ~ 17537220 (+) |
| tpk1 | NA | coding | downstream | 350309 | 17709687 ~ 17789321 (+) |
| pign | pign | coding | downstream | 567256 | 17926634 ~ 17945204 (+) |
| LOC110535422 | LOC106578412 | coding | downstream | 590051 | 17949429 ~ 17960000 (+) |
| G949103 | NA | non-coding | upstream | 2733 | 17356018 ~ 17356404 (+) |
| G949087 | NA | non-coding | upstream | 45864 | 17313051 ~ 17313273 (+) |
| G949044 | NA | non-coding | upstream | 125635 | 17232801 ~ 17233502 (+) |
| G949111 | NA | non-coding | downstream | 27757 | 17387135 ~ 17387367 (+) |
| G949120 | NA | non-coding | downstream | 43974 | 17403352 ~ 17403588 (+) |
| G949136 | LOC106578389 | non-coding | downstream | 69112 | 17428490 ~ 17459732 (+) |
| G949183 | NA | non-coding | downstream | 154443 | 17513821 ~ 17520003 (+) |
| G949186 | NA | non-coding | downstream | 157537 | 17516915 ~ 17518259 (+) |
| G948710 | NA | other | upstream | 757245 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 813848 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1023845 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1032730 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1148297 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1767287 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2401887 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5367175 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 6305910 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6416394 | 23775772 ~ 23776845 (+) |
