Gene
RNA
| Item | Value |
|---|---|
| gene id | G950188 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17669732 ~ 17669943 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1083478 | True | 212 | lncRNA | 0.37 | 1 | 17669732 | 17669943 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535414 | NA | coding | upstream | 132512 | 17444268 ~ 17537220 (+) |
| LOC118937326 | NA | coding | upstream | 278673 | 17386005 ~ 17391059 (+) |
| ezh2 | ezh2 | coding | upstream | 300523 | 17356706 ~ 17369209 (+) |
| LOC110535409 | LOC106578385 | coding | upstream | 317291 | 17342791 ~ 17352441 (+) |
| LOC110536567 | pkd1l1 | coding | upstream | 327101 | 17289622 ~ 17342631 (+) |
| tpk1 | NA | coding | downstream | 39744 | 17709687 ~ 17789321 (+) |
| pign | pign | coding | downstream | 256691 | 17926634 ~ 17945204 (+) |
| LOC110535422 | LOC106578412 | coding | downstream | 279486 | 17949429 ~ 17960000 (+) |
| hnf4g | hnf4g | coding | downstream | 290243 | 17960186 ~ 17981897 (+) |
| pex2 | pex2 | coding | downstream | 522681 | 18192624 ~ 18204153 (+) |
| G949255 | NA | non-coding | upstream | 32939 | 17634978 ~ 17636793 (+) |
| G949183 | NA | non-coding | upstream | 149729 | 17513821 ~ 17520003 (+) |
| G949186 | NA | non-coding | upstream | 151473 | 17516915 ~ 17518259 (+) |
| G949136 | LOC106578389 | non-coding | upstream | 210000 | 17428490 ~ 17459732 (+) |
| G949120 | NA | non-coding | upstream | 266144 | 17403352 ~ 17403588 (+) |
| G950225 | NA | non-coding | downstream | 19869 | 17689812 ~ 17690023 (+) |
| G950246 | NA | non-coding | downstream | 38452 | 17708395 ~ 17708618 (+) |
| G950317 | NA | non-coding | downstream | 160070 | 17830013 ~ 17830880 (+) |
| G950302 | NA | non-coding | downstream | 165355 | 17835298 ~ 17839157 (+) |
| G950303 | NA | non-coding | downstream | 170879 | 17840822 ~ 17851538 (+) |
| G948710 | NA | other | upstream | 1067840 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1124443 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1334440 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1343325 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1458892 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1456722 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 2091322 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 5056610 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5995345 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 6105829 | 23775772 ~ 23776845 (+) |
