Gene
RNA
| Item | Value |
|---|---|
| gene id | G950317 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17830013 ~ 17830880 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1083626 | True | 622 | lncRNA | 0.41 | 2 | 17830013 | 17830880 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tpk1 | NA | coding | upstream | 40692 | 17709687 ~ 17789321 (+) |
| LOC110535414 | NA | coding | upstream | 292793 | 17444268 ~ 17537220 (+) |
| LOC118937326 | NA | coding | upstream | 438954 | 17386005 ~ 17391059 (+) |
| ezh2 | ezh2 | coding | upstream | 460804 | 17356706 ~ 17369209 (+) |
| LOC110535409 | LOC106578385 | coding | upstream | 477572 | 17342791 ~ 17352441 (+) |
| pign | pign | coding | downstream | 95754 | 17926634 ~ 17945204 (+) |
| LOC110535422 | LOC106578412 | coding | downstream | 118549 | 17949429 ~ 17960000 (+) |
| hnf4g | hnf4g | coding | downstream | 129306 | 17960186 ~ 17981897 (+) |
| pex2 | pex2 | coding | downstream | 361744 | 18192624 ~ 18204153 (+) |
| LOC110535429 | nup58 | coding | downstream | 959290 | 18790170 ~ 18802871 (+) |
| G950246 | NA | non-coding | upstream | 121395 | 17708395 ~ 17708618 (+) |
| G950225 | NA | non-coding | upstream | 139990 | 17689812 ~ 17690023 (+) |
| G950188 | NA | non-coding | upstream | 160070 | 17669732 ~ 17669943 (+) |
| G949255 | NA | non-coding | upstream | 193220 | 17634978 ~ 17636793 (+) |
| G949183 | NA | non-coding | upstream | 310010 | 17513821 ~ 17520003 (+) |
| G950302 | NA | non-coding | downstream | 4418 | 17835298 ~ 17839157 (+) |
| G950303 | NA | non-coding | downstream | 9942 | 17840822 ~ 17851538 (+) |
| G950347 | NA | non-coding | downstream | 70479 | 17901359 ~ 17901870 (+) |
| G950378 | NA | non-coding | downstream | 125807 | 17956687 ~ 17958862 (+) |
| G950673 | NA | non-coding | downstream | 323223 | 18154103 ~ 18155431 (+) |
| G948710 | NA | other | upstream | 1228121 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1284724 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1494721 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1503606 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1619173 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1295785 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1930385 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4895673 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5834408 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5944892 | 23775772 ~ 23776845 (+) |
