G950302


Basic Information

Item Value
gene id G950302
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 17835298 ~ 17839157 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1083604
TGCCGTAAAAGGGAGAAACAGAAAGGATGTATTTTCAGAGTTTTGAATCAGGACAAATCCATCTACACCAGGCTCGGGCCAAAACGTGGCCACTATGTGGGGAACAGGATTTGAGACATGAGTCACAACCAGTCTTTATTCAGGCCTCAACAAATCTATTTTTCTGTCCGTTTACTCATATACAactacagtaacacacacacatatacacacacacatacatacacagctgaagttggaagtttacatacaccttagccaaatacatttaaactccgttattcacaattcctgacatcctAGTAaaaagttccctgtcttaggtcagttaggatcaccactttattttaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1083604 True 352 lncRNA 0.39 2 17835298 17839157

Neighbor

gene id symbol gene type direction distance location
tpk1 NA coding upstream 45977 17709687 ~ 17789321 (+)
LOC110535414 NA coding upstream 298078 17444268 ~ 17537220 (+)
LOC118937326 NA coding upstream 444239 17386005 ~ 17391059 (+)
ezh2 ezh2 coding upstream 466089 17356706 ~ 17369209 (+)
LOC110535409 LOC106578385 coding upstream 482857 17342791 ~ 17352441 (+)
pign pign coding downstream 87477 17926634 ~ 17945204 (+)
LOC110535422 LOC106578412 coding downstream 110272 17949429 ~ 17960000 (+)
hnf4g hnf4g coding downstream 121029 17960186 ~ 17981897 (+)
pex2 pex2 coding downstream 353467 18192624 ~ 18204153 (+)
LOC110535429 nup58 coding downstream 951013 18790170 ~ 18802871 (+)
G950317 NA non-coding upstream 4418 17830013 ~ 17830880 (+)
G950246 NA non-coding upstream 126680 17708395 ~ 17708618 (+)
G950225 NA non-coding upstream 145275 17689812 ~ 17690023 (+)
G950188 NA non-coding upstream 165355 17669732 ~ 17669943 (+)
G949255 NA non-coding upstream 198505 17634978 ~ 17636793 (+)
G950303 NA non-coding downstream 1665 17840822 ~ 17851538 (+)
G950347 NA non-coding downstream 62202 17901359 ~ 17901870 (+)
G950378 NA non-coding downstream 117530 17956687 ~ 17958862 (+)
G950673 NA non-coding downstream 314946 18154103 ~ 18155431 (+)
G948710 NA other upstream 1233406 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 1290009 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 1500006 16327393 ~ 16338373 (+)
G948587 NA other upstream 1508891 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 1624458 16209929 ~ 16211192 (+)
G951511 NA other downstream 1287508 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 1922108 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 4887396 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 5826131 23665288 ~ 23665930 (+)
G956797 NA other downstream 5936615 23775772 ~ 23776845 (+)

Expression


Co-expression Network