Gene
RNA
| Item | Value |
|---|---|
| gene id | G950303 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 17840822 ~ 17851538 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| retinol dehydrogenase 12-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1083606 | True | 504 | lncRNA | 0.49 | 3 | 17840822 | 17851538 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tpk1 | NA | coding | upstream | 51501 | 17709687 ~ 17789321 (+) |
| LOC110535414 | NA | coding | upstream | 303602 | 17444268 ~ 17537220 (+) |
| LOC118937326 | NA | coding | upstream | 449763 | 17386005 ~ 17391059 (+) |
| ezh2 | ezh2 | coding | upstream | 471613 | 17356706 ~ 17369209 (+) |
| LOC110535409 | LOC106578385 | coding | upstream | 488381 | 17342791 ~ 17352441 (+) |
| pign | pign | coding | downstream | 75096 | 17926634 ~ 17945204 (+) |
| LOC110535422 | LOC106578412 | coding | downstream | 97891 | 17949429 ~ 17960000 (+) |
| hnf4g | hnf4g | coding | downstream | 108648 | 17960186 ~ 17981897 (+) |
| pex2 | pex2 | coding | downstream | 341086 | 18192624 ~ 18204153 (+) |
| LOC110535429 | nup58 | coding | downstream | 938632 | 18790170 ~ 18802871 (+) |
| G950302 | NA | non-coding | upstream | 1665 | 17835298 ~ 17839157 (+) |
| G950317 | NA | non-coding | upstream | 9942 | 17830013 ~ 17830880 (+) |
| G950246 | NA | non-coding | upstream | 132204 | 17708395 ~ 17708618 (+) |
| G950225 | NA | non-coding | upstream | 150799 | 17689812 ~ 17690023 (+) |
| G950188 | NA | non-coding | upstream | 170879 | 17669732 ~ 17669943 (+) |
| G950347 | NA | non-coding | downstream | 49821 | 17901359 ~ 17901870 (+) |
| G950378 | NA | non-coding | downstream | 105149 | 17956687 ~ 17958862 (+) |
| G950673 | NA | non-coding | downstream | 302565 | 18154103 ~ 18155431 (+) |
| G950706 | NA | non-coding | downstream | 354817 | 18206355 ~ 18206604 (+) |
| G948710 | NA | other | upstream | 1238930 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1295533 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1505530 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1514415 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1629982 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 1275127 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1909727 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4875015 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5813750 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5924234 | 23775772 ~ 23776845 (+) |
