Gene
RNA
| Item | Value |
|---|---|
| gene id | G950706 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18206355 ~ 18206604 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109630516 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084097 | True | 250 | lncRNA | 0.54 | 1 | 18206355 | 18206604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex2 | pex2 | coding | upstream | 2202 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 224458 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 246355 | 17949429 ~ 17960000 (+) |
| pign | pign | coding | upstream | 261151 | 17926634 ~ 17945204 (+) |
| tpk1 | NA | coding | upstream | 417034 | 17709687 ~ 17789321 (+) |
| LOC110535429 | nup58 | coding | downstream | 583566 | 18790170 ~ 18802871 (+) |
| ankrd33ba | LOC106578420 | coding | downstream | 615730 | 18822334 ~ 18844891 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 1091975 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 1123377 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 1135377 | 19341981 ~ 19345685 (+) |
| G950673 | NA | non-coding | upstream | 50924 | 18154103 ~ 18155431 (+) |
| G950378 | NA | non-coding | upstream | 247493 | 17956687 ~ 17958862 (+) |
| G950347 | NA | non-coding | upstream | 304485 | 17901359 ~ 17901870 (+) |
| G950303 | NA | non-coding | upstream | 354817 | 17840822 ~ 17851538 (+) |
| G950708 | NA | non-coding | downstream | 3802 | 18210406 ~ 18210671 (+) |
| G950669 | LOC106578414 | non-coding | downstream | 28288 | 18234892 ~ 18238442 (+) |
| G950761 | NA | non-coding | downstream | 109995 | 18316599 ~ 18317453 (+) |
| G950787 | NA | non-coding | downstream | 153428 | 18360032 ~ 18369456 (+) |
| G951103 | NA | non-coding | downstream | 248997 | 18455601 ~ 18455904 (+) |
| G948710 | NA | other | upstream | 1604463 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1661066 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 1871063 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 1879948 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 1995515 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 920061 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1554661 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4519949 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5458684 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5569168 | 23775772 ~ 23776845 (+) |
