Gene
RNA
| Item | Value |
|---|---|
| gene id | G950787 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18360032 ~ 18369456 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084183 | True | 208 | lncRNA | 0.52 | 2 | 18360032 | 18369456 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex2 | pex2 | coding | upstream | 155879 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 378135 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 400032 | 17949429 ~ 17960000 (+) |
| pign | pign | coding | upstream | 414828 | 17926634 ~ 17945204 (+) |
| tpk1 | NA | coding | upstream | 570711 | 17709687 ~ 17789321 (+) |
| LOC110535429 | nup58 | coding | downstream | 420714 | 18790170 ~ 18802871 (+) |
| ankrd33ba | LOC106578420 | coding | downstream | 452878 | 18822334 ~ 18844891 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 929123 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 960525 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 972525 | 19341981 ~ 19345685 (+) |
| G950761 | NA | non-coding | upstream | 42579 | 18316599 ~ 18317453 (+) |
| G950669 | LOC106578414 | non-coding | upstream | 121590 | 18234892 ~ 18238442 (+) |
| G950708 | NA | non-coding | upstream | 149361 | 18210406 ~ 18210671 (+) |
| G950706 | NA | non-coding | upstream | 153428 | 18206355 ~ 18206604 (+) |
| G951103 | NA | non-coding | downstream | 86145 | 18455601 ~ 18455904 (+) |
| G951129 | NA | non-coding | downstream | 106270 | 18475726 ~ 18476057 (+) |
| G951135 | NA | non-coding | downstream | 111610 | 18481066 ~ 18481766 (+) |
| G951184 | NA | non-coding | downstream | 156594 | 18526050 ~ 18526319 (+) |
| G951225 | NA | non-coding | downstream | 192882 | 18562338 ~ 18595492 (+) |
| G948710 | NA | other | upstream | 1758140 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1814743 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2024740 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2033625 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2149192 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 757209 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1391809 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4357097 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5295832 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5406316 | 23775772 ~ 23776845 (+) |
