Gene
RNA
| Item | Value |
|---|---|
| gene id | G951129 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18475726 ~ 18476057 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084573 | True | 332 | lncRNA | 0.55 | 1 | 18475726 | 18476057 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex2 | pex2 | coding | upstream | 271573 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 493829 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 515726 | 17949429 ~ 17960000 (+) |
| pign | pign | coding | upstream | 530522 | 17926634 ~ 17945204 (+) |
| tpk1 | NA | coding | upstream | 686405 | 17709687 ~ 17789321 (+) |
| LOC110535429 | nup58 | coding | downstream | 314113 | 18790170 ~ 18802871 (+) |
| ankrd33ba | LOC106578420 | coding | downstream | 346277 | 18822334 ~ 18844891 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 822522 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 853924 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 865924 | 19341981 ~ 19345685 (+) |
| G951103 | NA | non-coding | upstream | 19822 | 18455601 ~ 18455904 (+) |
| G950787 | NA | non-coding | upstream | 106270 | 18360032 ~ 18369456 (+) |
| G950761 | NA | non-coding | upstream | 158273 | 18316599 ~ 18317453 (+) |
| G950669 | LOC106578414 | non-coding | upstream | 237284 | 18234892 ~ 18238442 (+) |
| G950708 | NA | non-coding | upstream | 265055 | 18210406 ~ 18210671 (+) |
| G951135 | NA | non-coding | downstream | 5009 | 18481066 ~ 18481766 (+) |
| G951184 | NA | non-coding | downstream | 49993 | 18526050 ~ 18526319 (+) |
| G951225 | NA | non-coding | downstream | 86281 | 18562338 ~ 18595492 (+) |
| G951270 | NA | non-coding | downstream | 173519 | 18649576 ~ 18677028 (+) |
| G951277 | tlr13 | non-coding | downstream | 241372 | 18717429 ~ 18727093 (+) |
| G948710 | NA | other | upstream | 1873834 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1930437 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2140434 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2149319 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2264886 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 650608 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1285208 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4250496 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5189231 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5299715 | 23775772 ~ 23776845 (+) |
