Gene
RNA
| Item | Value |
|---|---|
| gene id | G951135 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18481066 ~ 18481766 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084580 | True | 701 | lncRNA | 0.45 | 1 | 18481066 | 18481766 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pex2 | pex2 | coding | upstream | 276913 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 499169 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 521066 | 17949429 ~ 17960000 (+) |
| pign | pign | coding | upstream | 535862 | 17926634 ~ 17945204 (+) |
| tpk1 | NA | coding | upstream | 691745 | 17709687 ~ 17789321 (+) |
| LOC110535429 | nup58 | coding | downstream | 308404 | 18790170 ~ 18802871 (+) |
| ankrd33ba | LOC106578420 | coding | downstream | 340568 | 18822334 ~ 18844891 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 816813 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 848215 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 860215 | 19341981 ~ 19345685 (+) |
| G951129 | NA | non-coding | upstream | 5009 | 18475726 ~ 18476057 (+) |
| G951103 | NA | non-coding | upstream | 25162 | 18455601 ~ 18455904 (+) |
| G950787 | NA | non-coding | upstream | 111610 | 18360032 ~ 18369456 (+) |
| G950761 | NA | non-coding | upstream | 163613 | 18316599 ~ 18317453 (+) |
| G950669 | LOC106578414 | non-coding | upstream | 242624 | 18234892 ~ 18238442 (+) |
| G951184 | NA | non-coding | downstream | 44284 | 18526050 ~ 18526319 (+) |
| G951225 | NA | non-coding | downstream | 80572 | 18562338 ~ 18595492 (+) |
| G951270 | NA | non-coding | downstream | 167810 | 18649576 ~ 18677028 (+) |
| G951277 | tlr13 | non-coding | downstream | 235663 | 18717429 ~ 18727093 (+) |
| G948710 | NA | other | upstream | 1879174 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 1935777 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2145774 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2154659 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2270226 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 644899 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 1279499 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 4244787 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 5183522 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 5294006 | 23775772 ~ 23776845 (+) |
