G951713


Basic Information

Item Value
gene id G951713
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 18769814 ~ 18771583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1085257
gcaattagcaagacacccccaataaaggagtggttctgcaggtggtgaccacagaccacttctcagttcctatgcttcctggctgatgttttagtcacttttgaatgctggcggtgctttcactctagtggtagcatgagacggagtctacaacccacacaagtggctcaggtagtgcagctcatccaaatggaacatcaatgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgtccagagcatggaggcgctaccaggagacaggccagtacatcaggagacgtggaggaggccgtaggagggcaacaacccaacagcaggaccgctacctccgcctttgtgcaaggaggagcaggaggagcactgccagagccctgcaaaatgacctccagcaggccacaaatgtgcatatgtctgctcaaactgtcagaaacagactccatgagggtggtatgaggtaccgacgtccacaggtgggggtgttgcgcttacagcccaacaccgtgcaggacgttttgcatttgccagagaacaccaagattggtaaattcaccactggcgcctgttctcttcacagatgaaagcaggttcacactgagcacatgtgacagacgtgacagagtctggagacaccgtggagaacgttctgctgcctgcaacatcctccagcatgaccggtttggcggtgggtcagtcatggtgtggggtggcatttctttggggggccgcacagccctccatgtgctcgccagaggtagcctgattgccattaggtaccaagatgagatcctcagaccccttgtgagaccatatgctggtgcggttggccctgggttcctcctaatgcaagacaatgctagacctcatgtggctggagtgtgtcagcagttcctgcaagaggaaggcattgatgctatggactggcccgcctgttccccagacctgaatccaattgagcacatttgggacatcatgtctcgcttcatccaccaacgccacagactgtccaggag

Function

NR:

description
transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1085257 True 1025 TUCP 0.54 2 18769814 18771583

Neighbor

gene id symbol gene type direction distance location
LOC110535430 LOC106578418 coding downstream 15276 18749073 ~ 18754538 (-)
LOC110536576 tlr13 coding downstream 41476 18726709 ~ 18730235 (-)
LOC110535431 tlr13 coding downstream 46947 18717377 ~ 18722867 (-)
LOC118937472 NA coding downstream 325892 18443868 ~ 18443922 (-)
zfhx4 LOC106578414 coding downstream 404800 18234892 ~ 18365014 (-)
dap dap coding upstream 79526 18849188 ~ 18863855 (-)
LOC110535425 LOC107094192 coding upstream 103899 18875482 ~ 19269408 (-)
zc2hc1a zc2hc1a coding upstream 539289 19310872 ~ 19327592 (-)
trnat-agu-4 NA coding upstream 569958 19341541 ~ 19341614 (-)
LOC110536577 NA coding upstream 596979 19368562 ~ 19374232 (-)
G951245 NA non-coding downstream 164745 18604846 ~ 18605069 (-)
G951224 NA non-coding downstream 207884 18561730 ~ 18561930 (-)
G951215 NA non-coding downstream 213125 18548344 ~ 18556689 (-)
G951166 NA non-coding downstream 262187 18507217 ~ 18507627 (-)
G951738 NA non-coding upstream 44962 18816545 ~ 18816762 (-)
G951728 NA non-coding upstream 73819 18845402 ~ 18845791 (-)
G951761 NA non-coding upstream 100289 18871872 ~ 18872071 (-)
G951725 NA non-coding upstream 101211 18872794 ~ 18873195 (-)
G951763 NA non-coding upstream 110332 18881915 ~ 18882219 (-)
G951233 NA other downstream 172626 18592818 ~ 18597188 (-)
G951234 NA other downstream 182071 18585893 ~ 18587743 (-)
G951231 NA other downstream 186659 18577315 ~ 18583155 (-)
G950851 NA other downstream 612567 18155684 ~ 18157247 (-)
G952255 LOC106578453 other upstream 629971 19401554 ~ 19414736 (-)
G954441 NA other upstream 2306067 21077650 ~ 21078658 (-)
G954484 arhgef4 other upstream 2474431 21246014 ~ 21253309 (-)
G954919 NA other upstream 2808000 21579583 ~ 21579828 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G98375 NA non-coding CI01000016 null 9085228 ~ 9098103 (+)
bowfin (Amia calva) G89728 NA unknown CM030130.1 CM030130.1 39400524 ~ 39408261 (+)