Gene
RNA
| Item | Value |
|---|---|
| gene id | G951335 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18845356 ~ 18845789 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084845 | True | 434 | lncRNA | 0.37 | 1 | 18845356 | 18845789 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 465 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 42485 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 641203 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 863459 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 885356 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 452790 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 484192 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 496192 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 531346 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 555733 | 19401522 ~ 19414736 (+) |
| G951340 | NA | non-coding | upstream | 32590 | 18812408 ~ 18812766 (+) |
| G951277 | tlr13 | non-coding | upstream | 118263 | 18717429 ~ 18727093 (+) |
| G951270 | NA | non-coding | upstream | 168328 | 18649576 ~ 18677028 (+) |
| G951225 | NA | non-coding | upstream | 249864 | 18562338 ~ 18595492 (+) |
| G951352 | NA | non-coding | downstream | 383 | 18846172 ~ 18846434 (+) |
| G951353 | NA | non-coding | downstream | 1182 | 18846971 ~ 18847197 (+) |
| G951362 | NA | non-coding | downstream | 27062 | 18872851 ~ 18873196 (+) |
| G951367 | NA | non-coding | downstream | 34943 | 18880732 ~ 18880991 (+) |
| G951368 | NA | non-coding | downstream | 37195 | 18882984 ~ 18883263 (+) |
| G948710 | NA | other | upstream | 2243464 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2300067 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2510064 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2518949 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2634516 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 280876 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 915476 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3880764 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4819499 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4929983 | 23775772 ~ 23776845 (+) |
