Gene
RNA
| Item | Value |
|---|---|
| gene id | G951368 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 18882984 ~ 18883263 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: catenin delta-2-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084886 | True | 280 | lncRNA | 0.51 | 1 | 18882984 | 18883263 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 38093 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 80113 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 678831 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 901087 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 922984 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 415316 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 446718 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 458718 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 493872 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 518259 | 19401522 ~ 19414736 (+) |
| G951367 | NA | non-coding | upstream | 1993 | 18880732 ~ 18880991 (+) |
| G951362 | NA | non-coding | upstream | 9788 | 18872851 ~ 18873196 (+) |
| G951353 | NA | non-coding | upstream | 35787 | 18846971 ~ 18847197 (+) |
| G951352 | NA | non-coding | upstream | 36550 | 18846172 ~ 18846434 (+) |
| G951335 | NA | non-coding | upstream | 37195 | 18845356 ~ 18845789 (+) |
| G951369 | NA | non-coding | downstream | 2235 | 18885498 ~ 18885727 (+) |
| G951370 | NA | non-coding | downstream | 2514 | 18885777 ~ 18886106 (+) |
| G951392 | NA | non-coding | downstream | 43041 | 18926304 ~ 18926541 (+) |
| G951465 | NA | non-coding | downstream | 173035 | 19056298 ~ 19056512 (+) |
| G951468 | NA | non-coding | downstream | 179292 | 19062555 ~ 19062861 (+) |
| G948710 | NA | other | upstream | 2281092 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2337695 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2547692 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2556577 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2672144 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 243402 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 878002 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3843290 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4782025 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4892509 | 23775772 ~ 23776845 (+) |
