G951392


Basic Information

Item Value
gene id G951392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 18926304 ~ 18926541 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1084910
AtacagtaattttcttaatggATGCTctttattagtaactgggataagcaatttcataaatgtgtcaagtgcaacgTCTTTTTGCTTCTCATTAGAAAATGTTGGTTTTCCtggatatggctactatattgtgatcactacatccgatggatctggATATTGCTTTCAAgcatatttctgcagcattagtaaagatgtgatcagtACATGTTGATGCtttttgtaactaccctggtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1084910 True 238 lncRNA 0.35 1 18926304 18926541

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 81413 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 123433 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 722151 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 944407 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 966304 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 372038 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 403440 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 415440 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 450594 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 474981 19401522 ~ 19414736 (+)
G951370 NA non-coding upstream 40198 18885777 ~ 18886106 (+)
G951369 NA non-coding upstream 40577 18885498 ~ 18885727 (+)
G951368 NA non-coding upstream 43041 18882984 ~ 18883263 (+)
G951367 NA non-coding upstream 45313 18880732 ~ 18880991 (+)
G951362 NA non-coding upstream 53108 18872851 ~ 18873196 (+)
G951465 NA non-coding downstream 129757 19056298 ~ 19056512 (+)
G951468 NA non-coding downstream 136014 19062555 ~ 19062861 (+)
G951472 NA non-coding downstream 143267 19069808 ~ 19070019 (+)
G951473 LOC106578459 non-coding downstream 143825 19070366 ~ 19070672 (+)
G951477 NA non-coding downstream 147951 19074492 ~ 19074712 (+)
G948710 NA other upstream 2324412 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2381015 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2591012 16327393 ~ 16338373 (+)
G948587 NA other upstream 2599897 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 2715464 16209929 ~ 16211192 (+)
G951511 NA other downstream 200124 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 834724 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3800012 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4738747 23665288 ~ 23665930 (+)
G956797 NA other downstream 4849231 23775772 ~ 23776845 (+)

Expression


Co-expression Network