G951465


Basic Information

Item Value
gene id G951465
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19056298 ~ 19056512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1084987
caaagactggcggatgaatcttttttttgtgtttttggtgaacagttttccctgggatttttactcctgaacacgttctgttatagccacagacatgatttaaccagttttagaaacttcagagtgttttctatacacacatacttattatatgcatatactatattcctggcatgagtagcaggactttgaaatgttgcgcgatttgtaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1084987 True 215 lncRNA 0.35 1 19056298 19056512

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 211407 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 253427 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 852145 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 1074401 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 1096298 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 242067 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 273469 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 285469 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 320623 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 345010 19401522 ~ 19414736 (+)
G951392 NA non-coding upstream 129757 18926304 ~ 18926541 (+)
G951370 NA non-coding upstream 170192 18885777 ~ 18886106 (+)
G951369 NA non-coding upstream 170571 18885498 ~ 18885727 (+)
G951368 NA non-coding upstream 173035 18882984 ~ 18883263 (+)
G951367 NA non-coding upstream 175307 18880732 ~ 18880991 (+)
G951468 NA non-coding downstream 6043 19062555 ~ 19062861 (+)
G951472 NA non-coding downstream 13296 19069808 ~ 19070019 (+)
G951473 LOC106578459 non-coding downstream 13854 19070366 ~ 19070672 (+)
G951477 NA non-coding downstream 17980 19074492 ~ 19074712 (+)
G951480 NA non-coding downstream 25571 19082083 ~ 19082332 (+)
G948710 NA other upstream 2454406 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2511009 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2721006 16327393 ~ 16338373 (+)
G948587 NA other upstream 2729891 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 2845458 16209929 ~ 16211192 (+)
G951511 NA other downstream 70153 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 704753 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3670041 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4608776 23665288 ~ 23665930 (+)
G956797 NA other downstream 4719260 23775772 ~ 23776845 (+)

Expression


Co-expression Network