Gene
RNA
| Item | Value |
|---|---|
| gene id | G951473 |
| gene name | LOC106578459 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19070366 ~ 19070672 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| catenin delta-2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1084995 | True | 307 | lncRNA | 0.57 | 1 | 19070366 | 19070672 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 225475 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 267495 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 866213 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 1088469 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 1110366 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 227907 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 259309 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 271309 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 306463 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 330850 | 19401522 ~ 19414736 (+) |
| G951472 | NA | non-coding | upstream | 347 | 19069808 ~ 19070019 (+) |
| G951468 | NA | non-coding | upstream | 7505 | 19062555 ~ 19062861 (+) |
| G951465 | NA | non-coding | upstream | 13854 | 19056298 ~ 19056512 (+) |
| G951392 | NA | non-coding | upstream | 143825 | 18926304 ~ 18926541 (+) |
| G951370 | NA | non-coding | upstream | 184260 | 18885777 ~ 18886106 (+) |
| G951477 | NA | non-coding | downstream | 3820 | 19074492 ~ 19074712 (+) |
| G951480 | NA | non-coding | downstream | 11411 | 19082083 ~ 19082332 (+) |
| G951481 | NA | non-coding | downstream | 12152 | 19082824 ~ 19083033 (+) |
| G951483 | NA | non-coding | downstream | 13206 | 19083878 ~ 19084081 (+) |
| G951487 | NA | non-coding | downstream | 17475 | 19088147 ~ 19088362 (+) |
| G948710 | NA | other | upstream | 2468474 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2525077 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2735074 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2743959 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2859526 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 55993 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 690593 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3655881 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4594616 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4705100 | 23775772 ~ 23776845 (+) |
