G951477


Basic Information

Item Value
gene id G951477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19074492 ~ 19074712 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1084999
aacgtggtaccttcagtcgtttgtaaattgctcccaaggatgaaccagacttgtggaggtttacaatattttttctgaggtcttggctgatttttttggattttcccatgatttcaagcaaagaggcagtgagtttgaaggtaagcattgaaatacatccacaggtccacctccaattgactcaaatgatgtcaattagcctatcagaagcttctaaagcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1084999 True 221 lncRNA 0.40 1 19074492 19074712

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 229601 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 271621 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 870339 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 1092595 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 1114492 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 223867 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 255269 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 267269 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 302423 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 326810 19401522 ~ 19414736 (+)
G951473 LOC106578459 non-coding upstream 3820 19070366 ~ 19070672 (+)
G951472 NA non-coding upstream 4473 19069808 ~ 19070019 (+)
G951468 NA non-coding upstream 11631 19062555 ~ 19062861 (+)
G951465 NA non-coding upstream 17980 19056298 ~ 19056512 (+)
G951392 NA non-coding upstream 147951 18926304 ~ 18926541 (+)
G951480 NA non-coding downstream 7371 19082083 ~ 19082332 (+)
G951481 NA non-coding downstream 8112 19082824 ~ 19083033 (+)
G951483 NA non-coding downstream 9166 19083878 ~ 19084081 (+)
G951487 NA non-coding downstream 13435 19088147 ~ 19088362 (+)
G951501 NA non-coding downstream 36257 19110969 ~ 19111223 (+)
G948710 NA other upstream 2472600 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2529203 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2739200 16327393 ~ 16338373 (+)
G948587 NA other upstream 2748085 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 2863652 16209929 ~ 16211192 (+)
G951511 NA other downstream 51953 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 686553 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3651841 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4590576 23665288 ~ 23665930 (+)
G956797 NA other downstream 4701060 23775772 ~ 23776845 (+)

Expression


Co-expression Network