G951481


Basic Information

Item Value
gene id G951481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19082824 ~ 19083033 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1085003
cacacacacacacaccataccacaaacACAGTTTTCATCTGagccactctgtctttgtctGACATTTAGTTGAAAGTTGCGTGTAACTCACCAGAAGTGCTCTTAGGCTTTTTAGGCTTTTACATTTCTCTACATAACCAACAGGAAATGACAGCCTTTAACCACCATCTCTACCACCTCTGGAACTAAAAATGCAGGACTAtattaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1085003 True 210 lncRNA 0.40 1 19082824 19083033

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 237933 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 279953 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 878671 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 1100927 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 1122824 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 215546 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 246948 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 258948 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 294102 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 318489 19401522 ~ 19414736 (+)
G951480 NA non-coding upstream 492 19082083 ~ 19082332 (+)
G951477 NA non-coding upstream 8112 19074492 ~ 19074712 (+)
G951473 LOC106578459 non-coding upstream 12152 19070366 ~ 19070672 (+)
G951472 NA non-coding upstream 12805 19069808 ~ 19070019 (+)
G951468 NA non-coding upstream 19963 19062555 ~ 19062861 (+)
G951483 NA non-coding downstream 845 19083878 ~ 19084081 (+)
G951487 NA non-coding downstream 5114 19088147 ~ 19088362 (+)
G951501 NA non-coding downstream 27936 19110969 ~ 19111223 (+)
G951502 NA non-coding downstream 28587 19111620 ~ 19111831 (+)
G951510 NA non-coding downstream 42528 19125561 ~ 19126440 (+)
G948710 NA other upstream 2480932 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2537535 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2747532 16327393 ~ 16338373 (+)
G948587 NA other upstream 2756417 16323350 ~ 16326407 (+)
ccl20b LOC100135878 other upstream 2871984 16209929 ~ 16211192 (+)
G951511 NA other downstream 43632 19126665 ~ 19127085 (+)
phldb2b tcpe other downstream 678232 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3643520 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4582255 23665288 ~ 23665930 (+)
G956797 NA other downstream 4692739 23775772 ~ 23776845 (+)

Expression


Co-expression Network