Gene
RNA
| Item | Value |
|---|---|
| gene id | G951510 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19125561 ~ 19126440 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1085032 | True | 334 | lncRNA | 0.50 | 2 | 19125561 | 19126440 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 280670 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 322690 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 921408 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 1143664 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 1165561 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 172139 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 203541 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 215541 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 250695 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 275082 | 19401522 ~ 19414736 (+) |
| G951502 | NA | non-coding | upstream | 13730 | 19111620 ~ 19111831 (+) |
| G951501 | NA | non-coding | upstream | 14338 | 19110969 ~ 19111223 (+) |
| G951487 | NA | non-coding | upstream | 37199 | 19088147 ~ 19088362 (+) |
| G951483 | NA | non-coding | upstream | 41480 | 19083878 ~ 19084081 (+) |
| G951481 | NA | non-coding | upstream | 42528 | 19082824 ~ 19083033 (+) |
| G951519 | NA | non-coding | downstream | 8998 | 19135438 ~ 19135662 (+) |
| G951531 | NA | non-coding | downstream | 30788 | 19157228 ~ 19157556 (+) |
| G951548 | NA | non-coding | downstream | 52970 | 19179410 ~ 19179650 (+) |
| G951555 | NA | non-coding | downstream | 67997 | 19194437 ~ 19194706 (+) |
| G951556 | NA | non-coding | downstream | 68998 | 19195438 ~ 19195657 (+) |
| G948710 | NA | other | upstream | 2523669 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2580272 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2790269 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2799154 | 16323350 ~ 16326407 (+) |
| ccl20b | LOC100135878 | other | upstream | 2914721 | 16209929 ~ 16211192 (+) |
| G951511 | NA | other | downstream | 225 | 19126665 ~ 19127085 (+) |
| phldb2b | tcpe | other | downstream | 634825 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3600113 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4538848 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4649332 | 23775772 ~ 23776845 (+) |
