Gene
RNA
| Item | Value |
|---|---|
| gene id | G951568 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19215329 ~ 19215543 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1085090 | True | 215 | lncRNA | 0.46 | 1 | 19215329 | 19215543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 370438 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 412458 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 1011176 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 1233432 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 1255329 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 83036 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 114438 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 126438 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 161592 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 185979 | 19401522 ~ 19414736 (+) |
| G951565 | NA | non-coding | upstream | 7442 | 19207652 ~ 19207887 (+) |
| G951563 | NA | non-coding | upstream | 11322 | 19203757 ~ 19204007 (+) |
| G951560 | NA | non-coding | upstream | 14929 | 19200166 ~ 19200400 (+) |
| G951556 | NA | non-coding | upstream | 19672 | 19195438 ~ 19195657 (+) |
| G951555 | NA | non-coding | upstream | 20623 | 19194437 ~ 19194706 (+) |
| G951577 | NA | non-coding | downstream | 10858 | 19226401 ~ 19226616 (+) |
| G951582 | NA | non-coding | downstream | 16356 | 19231899 ~ 19232175 (+) |
| G951587 | NA | non-coding | downstream | 22333 | 19237876 ~ 19238170 (+) |
| G951603 | NA | non-coding | downstream | 47370 | 19262913 ~ 19263189 (+) |
| G951605 | NA | non-coding | downstream | 48809 | 19264352 ~ 19264573 (+) |
| G951511 | NA | other | upstream | 88244 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 2613437 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2670040 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2880037 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2888922 | 16323350 ~ 16326407 (+) |
| phldb2b | tcpe | other | downstream | 545722 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3511010 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4449745 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4560229 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 5384928 | 24600471 ~ 24601653 (+) |
