G951587


Basic Information

Item Value
gene id G951587
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19237876 ~ 19238170 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1085109
tatttacaatgacggtctaccaaaagacaaaaggcctcctgtggggacggggactgggattaaaaatacaaaatatatatatatataaatataggacaaaacacacatcacgacaagagagacaacacaacactacctaaagagagacctaagacaacaacatagcaaggcagcaacacatgacaacacagcatggtagcaacacaacatgacaacacagcatggttgcaacacaacatgacaacaacatggttgcaacacaacatggtagcagcacaaaacatggtacaaacat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1085109 True 295 lncRNA 0.40 1 19237876 19238170

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 392985 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 435005 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 1033723 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 1255979 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 1277876 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 60409 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 91811 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 103811 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 138965 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 163352 19401522 ~ 19414736 (+)
G951582 NA non-coding upstream 5701 19231899 ~ 19232175 (+)
G951577 NA non-coding upstream 11260 19226401 ~ 19226616 (+)
G951568 NA non-coding upstream 22333 19215329 ~ 19215543 (+)
G951565 NA non-coding upstream 29989 19207652 ~ 19207887 (+)
G951563 NA non-coding upstream 33869 19203757 ~ 19204007 (+)
G951603 NA non-coding downstream 24743 19262913 ~ 19263189 (+)
G951605 NA non-coding downstream 26182 19264352 ~ 19264573 (+)
G951610 NA non-coding downstream 39037 19277207 ~ 19277408 (+)
G951619 NA non-coding downstream 49813 19287983 ~ 19288197 (+)
G951620 NA non-coding downstream 50686 19288856 ~ 19289260 (+)
G951511 NA other upstream 110791 19126665 ~ 19127085 (+)
G948710 NA other upstream 2635984 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2692587 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2902584 16327393 ~ 16338373 (+)
G948587 NA other upstream 2911469 16323350 ~ 16326407 (+)
phldb2b tcpe other downstream 523095 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3488383 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4427118 23665288 ~ 23665930 (+)
G956797 NA other downstream 4537602 23775772 ~ 23776845 (+)
G957942 NA other downstream 5362301 24600471 ~ 24601653 (+)

Expression


Co-expression Network