Gene
RNA
| Item | Value |
|---|---|
| gene id | G951605 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19264352 ~ 19264573 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1085129 | True | 222 | lncRNA | 0.42 | 1 | 19264352 | 19264573 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ankrd33ba | LOC106578420 | coding | upstream | 419461 | 18822334 ~ 18844891 (+) |
| LOC110535429 | nup58 | coding | upstream | 461481 | 18790170 ~ 18802871 (+) |
| pex2 | pex2 | coding | upstream | 1060199 | 18192624 ~ 18204153 (+) |
| hnf4g | hnf4g | coding | upstream | 1282455 | 17960186 ~ 17981897 (+) |
| LOC110535422 | LOC106578412 | coding | upstream | 1304352 | 17949429 ~ 17960000 (+) |
| LOC110535436 | LOC106578460 | coding | downstream | 34006 | 19298579 ~ 19310732 (+) |
| LOC110535438 | NA | coding | downstream | 65408 | 19329981 ~ 19335648 (+) |
| ssm4 | ssm4 | coding | downstream | 77408 | 19341981 ~ 19345685 (+) |
| LOC110535439 | LOC106578454 | coding | downstream | 112562 | 19377135 ~ 19385929 (+) |
| LOC110535440 | LOC106590594 | coding | downstream | 136949 | 19401522 ~ 19414736 (+) |
| G951603 | NA | non-coding | upstream | 1163 | 19262913 ~ 19263189 (+) |
| G951587 | NA | non-coding | upstream | 26182 | 19237876 ~ 19238170 (+) |
| G951582 | NA | non-coding | upstream | 32177 | 19231899 ~ 19232175 (+) |
| G951577 | NA | non-coding | upstream | 37736 | 19226401 ~ 19226616 (+) |
| G951568 | NA | non-coding | upstream | 48809 | 19215329 ~ 19215543 (+) |
| G951610 | NA | non-coding | downstream | 12634 | 19277207 ~ 19277408 (+) |
| G951619 | NA | non-coding | downstream | 23410 | 19287983 ~ 19288197 (+) |
| G951620 | NA | non-coding | downstream | 24283 | 19288856 ~ 19289260 (+) |
| G951621 | NA | non-coding | downstream | 25891 | 19290464 ~ 19290685 (+) |
| G951623 | NA | non-coding | downstream | 27943 | 19292516 ~ 19292726 (+) |
| G951511 | NA | other | upstream | 137267 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 2662460 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 2719063 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 2929060 | 16327393 ~ 16338373 (+) |
| G948587 | NA | other | upstream | 2937945 | 16323350 ~ 16326407 (+) |
| phldb2b | tcpe | other | downstream | 496692 | 19740565 ~ 19799150 (+) |
| tlcd4a | LOC106570700 | other | downstream | 3461980 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 4400715 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 4511199 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 5335898 | 24600471 ~ 24601653 (+) |
