G951624


Basic Information

Item Value
gene id G951624
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 19294394 ~ 19294787 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1085148
TCCTGGAACTGATGGGCCAATGAAGTATGAGGAaatctcatcacacacacacagtcaatctTGTTTCAAAGACGCATAGAAATGGTCAGCGCTTTCTACGGCGATGATTAATTCAAAGCATTTAAGACACTATATGTAGAACACTATACACATATTAGAGCCTATGTATATGCATAGGCCTATATTTTATCTTTATGTAACTAGGAatgccagttaagaacaaattcttatttacaatgacgtcttaggaacagtggattaactgccttgttcaggggcagaacaacagatttttaccttgtcagctcggggattcgatcttgcaacctttcgggttactagtccaacgctctaaccactaggctacctgccgtcccagtATGAGTATGAGCcc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1085148 True 394 lncRNA 0.41 1 19294394 19294787

Neighbor

gene id symbol gene type direction distance location
ankrd33ba LOC106578420 coding upstream 449503 18822334 ~ 18844891 (+)
LOC110535429 nup58 coding upstream 491523 18790170 ~ 18802871 (+)
pex2 pex2 coding upstream 1090241 18192624 ~ 18204153 (+)
hnf4g hnf4g coding upstream 1312497 17960186 ~ 17981897 (+)
LOC110535422 LOC106578412 coding upstream 1334394 17949429 ~ 17960000 (+)
LOC110535436 LOC106578460 coding downstream 3792 19298579 ~ 19310732 (+)
LOC110535438 NA coding downstream 35194 19329981 ~ 19335648 (+)
ssm4 ssm4 coding downstream 47194 19341981 ~ 19345685 (+)
LOC110535439 LOC106578454 coding downstream 82348 19377135 ~ 19385929 (+)
LOC110535440 LOC106590594 coding downstream 106735 19401522 ~ 19414736 (+)
G951623 NA non-coding upstream 1668 19292516 ~ 19292726 (+)
G951621 NA non-coding upstream 3709 19290464 ~ 19290685 (+)
G951620 NA non-coding upstream 5134 19288856 ~ 19289260 (+)
G951619 NA non-coding upstream 6197 19287983 ~ 19288197 (+)
G951610 NA non-coding upstream 16986 19277207 ~ 19277408 (+)
G951627 NA non-coding downstream 2568 19297355 ~ 19297559 (+)
G952064 NA non-coding downstream 20813 19315600 ~ 19315953 (+)
G951511 NA other upstream 167309 19126665 ~ 19127085 (+)
G948710 NA other upstream 2692502 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 2749105 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 2959102 16327393 ~ 16338373 (+)
G948587 NA other upstream 2967987 16323350 ~ 16326407 (+)
phldb2b tcpe other downstream 466478 19740565 ~ 19799150 (+)
tlcd4a LOC106570700 other downstream 3431766 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 4370501 23665288 ~ 23665930 (+)
G956797 NA other downstream 4480985 23775772 ~ 23776845 (+)
G957942 NA other downstream 5305684 24600471 ~ 24601653 (+)

Expression


Co-expression Network