Gene
RNA
| Item | Value |
|---|---|
| gene id | G953170 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 19672535 ~ 19672769 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1086826 | True | 235 | lncRNA | 0.36 | 1 | 19672535 | 19672769 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zmp:0000000991 | LOC106578445 | coding | downstream | 12026 | 19643041 ~ 19660509 (-) |
| LOC110535446 | LOC106578446 | coding | downstream | 43308 | 19627035 ~ 19629227 (-) |
| LOC110535445 | ndub4 | coding | downstream | 58744 | 19611791 ~ 19613791 (-) |
| arxa | LOC106578448 | coding | downstream | 86196 | 19565431 ~ 19586339 (-) |
| LOC110535442 | LOC106578451 | coding | downstream | 237809 | 19426819 ~ 19434726 (-) |
| abcc13 | LOC106578442 | coding | upstream | 11867 | 19684636 ~ 19701763 (-) |
| LOC110535450 | tcpe | coding | upstream | 121357 | 19794126 ~ 19799188 (-) |
| sema5a | LOC106578437 | coding | upstream | 217808 | 19890577 ~ 20084385 (-) |
| si:dkey-118j18.2 | LOC106578436 | coding | upstream | 434510 | 20107279 ~ 20118785 (-) |
| timm21 | timm21 | coding | upstream | 457749 | 20130518 ~ 20133776 (-) |
| G952465 | NA | non-coding | downstream | 8492 | 19663775 ~ 19664043 (-) |
| G952393 | NA | non-coding | downstream | 111180 | 19560175 ~ 19561355 (-) |
| G952407 | NA | non-coding | downstream | 117679 | 19554352 ~ 19554856 (-) |
| G952366 | NA | non-coding | downstream | 176313 | 19495370 ~ 19496222 (-) |
| G952255 | LOC106578453 | non-coding | downstream | 257799 | 19401554 ~ 19414736 (-) |
| G953236 | LOC106578440 | non-coding | upstream | 95458 | 19768227 ~ 19769329 (-) |
| G953243 | NA | non-coding | upstream | 112885 | 19785654 ~ 19787002 (-) |
| G953255 | NA | non-coding | upstream | 144388 | 19817157 ~ 19818290 (-) |
| G953254 | NA | non-coding | upstream | 147386 | 19820155 ~ 19849554 (-) |
| G953283 | NA | non-coding | upstream | 186050 | 19858819 ~ 19859168 (-) |
| dap | dap | other | downstream | 808760 | 18849188 ~ 18863855 (-) |
| G951713 | NA | other | downstream | 900952 | 18769814 ~ 18771583 (-) |
| G951233 | NA | other | downstream | 1075347 | 18592818 ~ 18597188 (-) |
| G951234 | NA | other | downstream | 1084792 | 18585893 ~ 18587743 (-) |
| G954441 | NA | other | upstream | 1404881 | 21077650 ~ 21078658 (-) |
| G954484 | arhgef4 | other | upstream | 1573245 | 21246014 ~ 21253309 (-) |
| G954919 | NA | other | upstream | 1906814 | 21579583 ~ 21579828 (-) |
| G956234 | LOC106578494 | other | upstream | 3080511 | 22753280 ~ 22756973 (-) |
| G956366 | NA | other | upstream | 3334381 | 23007150 ~ 23043985 (-) |
