Gene
RNA
| Item | Value |
|---|---|
| gene id | G953513 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 20263451 ~ 20263916 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1087202 | True | 349 | lncRNA | 0.34 | 2 | 20263451 | 20263916 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| timm21 | timm21 | coding | downstream | 129675 | 20130518 ~ 20133776 (-) |
| si:dkey-118j18.2 | LOC106578436 | coding | downstream | 144666 | 20107279 ~ 20118785 (-) |
| sema5a | LOC106578437 | coding | downstream | 179066 | 19890577 ~ 20084385 (-) |
| LOC110535450 | tcpe | coding | downstream | 464263 | 19794126 ~ 19799188 (-) |
| abcc13 | LOC106578442 | coding | downstream | 561688 | 19684636 ~ 19701763 (-) |
| fbxo15 | fbxo15 | coding | upstream | 190864 | 20454780 ~ 20487396 (-) |
| LOC110535458 | LOC106578426 | coding | upstream | 479410 | 20743326 ~ 20747932 (-) |
| dok6 | dok6 | coding | upstream | 571589 | 20835505 ~ 20916389 (-) |
| LOC110535463 | chst2 | coding | upstream | 800132 | 21064048 ~ 21066774 (-) |
| pcolce2b | pcolce2 | coding | upstream | 853958 | 21117874 ~ 21130446 (-) |
| G953378 | NA | non-coding | downstream | 261832 | 20000000 ~ 20001619 (-) |
| G953286 | NA | non-coding | downstream | 401782 | 19861421 ~ 19861669 (-) |
| G953284 | NA | non-coding | downstream | 403714 | 19859502 ~ 19859737 (-) |
| G953283 | NA | non-coding | downstream | 404283 | 19858819 ~ 19859168 (-) |
| G953254 | NA | non-coding | downstream | 413897 | 19820155 ~ 19849554 (-) |
| G953549 | NA | non-coding | upstream | 72193 | 20336109 ~ 20336990 (-) |
| G953579 | NA | non-coding | upstream | 111411 | 20375327 ~ 20375586 (-) |
| G953591 | NA | non-coding | upstream | 126015 | 20389931 ~ 20390189 (-) |
| G953597 | NA | non-coding | upstream | 133057 | 20396973 ~ 20397214 (-) |
| G953602 | NA | non-coding | upstream | 140310 | 20404226 ~ 20404518 (-) |
| G952255 | LOC106578453 | other | downstream | 848715 | 19401554 ~ 19414736 (-) |
| dap | dap | other | downstream | 1399676 | 18849188 ~ 18863855 (-) |
| G951713 | NA | other | downstream | 1491868 | 18769814 ~ 18771583 (-) |
| G951233 | NA | other | downstream | 1666263 | 18592818 ~ 18597188 (-) |
| G951234 | NA | other | downstream | 1675708 | 18585893 ~ 18587743 (-) |
| G954441 | NA | other | upstream | 813734 | 21077650 ~ 21078658 (-) |
| G954484 | arhgef4 | other | upstream | 982098 | 21246014 ~ 21253309 (-) |
| G954919 | NA | other | upstream | 1315667 | 21579583 ~ 21579828 (-) |
| G956234 | LOC106578494 | other | upstream | 2489364 | 22753280 ~ 22756973 (-) |
| G956366 | NA | other | upstream | 2743234 | 23007150 ~ 23043985 (-) |
