Gene
RNA
| Item | Value |
|---|---|
| gene id | G953942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 20968882 ~ 20969243 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1087692 | True | 230 | lncRNA | 0.33 | 2 | 20968882 | 20969243 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cd226 | cd226 | coding | upstream | 135500 | 20821163 ~ 20833382 (+) |
| rttn | rttn | coding | upstream | 148333 | 20760571 ~ 20820549 (+) |
| cbln2b | cbln2 | coding | upstream | 469877 | 20495472 ~ 20499005 (+) |
| LOC110536583 | LOC106578430 | coding | upstream | 765122 | 20201200 ~ 20203760 (+) |
| mtrr | LOC106578438 | coding | upstream | 1134428 | 19801737 ~ 19834454 (+) |
| trpc1 | trpc1 | coding | downstream | 100522 | 21069765 ~ 21117062 (+) |
| LOC110535465 | LOC106578468 | coding | downstream | 162240 | 21131483 ~ 21149309 (+) |
| LOC110535467 | arhg4 | coding | downstream | 278580 | 21247823 ~ 21325738 (+) |
| fbxo45 | LOC106578473 | coding | downstream | 376233 | 21345476 ~ 21347872 (+) |
| nrros | LOC106578474 | coding | downstream | 382459 | 21351702 ~ 21357076 (+) |
| G953893 | NA | non-coding | upstream | 75244 | 20890268 ~ 20893638 (+) |
| G953859 | NA | non-coding | upstream | 162227 | 20805942 ~ 20806655 (+) |
| G953804 | NA | non-coding | upstream | 219180 | 20749492 ~ 20749702 (+) |
| G953056 | NA | non-coding | upstream | 225719 | 20742832 ~ 20743163 (+) |
| G953162 | NA | non-coding | upstream | 227630 | 20737630 ~ 20741252 (+) |
| G953970 | NA | non-coding | downstream | 47776 | 21017019 ~ 21017270 (+) |
| G953971 | NA | non-coding | downstream | 49989 | 21019232 ~ 21019600 (+) |
| G953973 | NA | non-coding | downstream | 52620 | 21021863 ~ 21022096 (+) |
| G953976 | NA | non-coding | downstream | 58962 | 21028205 ~ 21028412 (+) |
| G953980 | NA | non-coding | downstream | 63085 | 21032328 ~ 21032542 (+) |
| phldb2b | tcpe | other | upstream | 1199529 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 1841797 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 4366990 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 4423593 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 4633590 | 16327393 ~ 16338373 (+) |
| tlcd4a | LOC106570700 | other | downstream | 1757310 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 2696045 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 2806529 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 3631228 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 3825357 | 24794600 ~ 24795736 (+) |
