Gene
RNA
| Item | Value |
|---|---|
| gene id | G953996 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 21059420 ~ 21059729 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1087754 | True | 310 | lncRNA | 0.36 | 1 | 21059420 | 21059729 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cd226 | cd226 | coding | upstream | 226038 | 20821163 ~ 20833382 (+) |
| rttn | rttn | coding | upstream | 238871 | 20760571 ~ 20820549 (+) |
| cbln2b | cbln2 | coding | upstream | 560415 | 20495472 ~ 20499005 (+) |
| LOC110536583 | LOC106578430 | coding | upstream | 855660 | 20201200 ~ 20203760 (+) |
| mtrr | LOC106578438 | coding | upstream | 1224966 | 19801737 ~ 19834454 (+) |
| trpc1 | trpc1 | coding | downstream | 10036 | 21069765 ~ 21117062 (+) |
| LOC110535465 | LOC106578468 | coding | downstream | 71754 | 21131483 ~ 21149309 (+) |
| LOC110535467 | arhg4 | coding | downstream | 188094 | 21247823 ~ 21325738 (+) |
| fbxo45 | LOC106578473 | coding | downstream | 285747 | 21345476 ~ 21347872 (+) |
| nrros | LOC106578474 | coding | downstream | 291973 | 21351702 ~ 21357076 (+) |
| G953980 | NA | non-coding | upstream | 26878 | 21032328 ~ 21032542 (+) |
| G953976 | NA | non-coding | upstream | 31008 | 21028205 ~ 21028412 (+) |
| G953973 | NA | non-coding | upstream | 37324 | 21021863 ~ 21022096 (+) |
| G953971 | NA | non-coding | upstream | 39820 | 21019232 ~ 21019600 (+) |
| G953970 | NA | non-coding | upstream | 42150 | 21017019 ~ 21017270 (+) |
| G954003 | chst2 | non-coding | downstream | 4342 | 21064071 ~ 21066682 (+) |
| G954005 | NA | non-coding | downstream | 8725 | 21068454 ~ 21068675 (+) |
| G954009 | NA | non-coding | downstream | 17470 | 21077199 ~ 21077622 (+) |
| G954011 | NA | non-coding | downstream | 20205 | 21079934 ~ 21080323 (+) |
| G954048 | NA | non-coding | downstream | 116180 | 21175909 ~ 21177113 (+) |
| phldb2b | tcpe | other | upstream | 1290067 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 1932335 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 4457528 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 4514131 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 4724128 | 16327393 ~ 16338373 (+) |
| tlcd4a | LOC106570700 | other | downstream | 1666824 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 2605559 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 2716043 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 3540742 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 3734871 | 24794600 ~ 24795736 (+) |
