G954009


Basic Information

Item Value
gene id G954009
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 21077199 ~ 21077622 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1087773
GCATGTCGATGGGAATAAGTTTTAAATAGATACAGAACAAGGAACAAGAAGGAGTTTTAAATAGGTACAGAACAAGGAACAAGAAGTCAAATGATGTAAACTTTTAGAAACAGCTTTGTGActcttgtcttctctctctctttctttctctctctctctttctttctttctctctctctctctctctctctctctctctctctctctctccctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1087773 True 214 lncRNA 0.38 2 21077199 21077622

Neighbor

gene id symbol gene type direction distance location
cd226 cd226 coding upstream 243817 20821163 ~ 20833382 (+)
rttn rttn coding upstream 256650 20760571 ~ 20820549 (+)
cbln2b cbln2 coding upstream 578194 20495472 ~ 20499005 (+)
LOC110536583 LOC106578430 coding upstream 873439 20201200 ~ 20203760 (+)
mtrr LOC106578438 coding upstream 1242745 19801737 ~ 19834454 (+)
LOC110535465 LOC106578468 coding downstream 53861 21131483 ~ 21149309 (+)
LOC110535467 arhg4 coding downstream 170201 21247823 ~ 21325738 (+)
fbxo45 LOC106578473 coding downstream 267854 21345476 ~ 21347872 (+)
nrros LOC106578474 coding downstream 274080 21351702 ~ 21357076 (+)
LOC110536585 vav3 coding downstream 345802 21423424 ~ 21550872 (+)
G954005 NA non-coding upstream 8524 21068454 ~ 21068675 (+)
G954003 chst2 non-coding upstream 10517 21064071 ~ 21066682 (+)
G953996 NA non-coding upstream 17470 21059420 ~ 21059729 (+)
G953980 NA non-coding upstream 44657 21032328 ~ 21032542 (+)
G953976 NA non-coding upstream 48787 21028205 ~ 21028412 (+)
G954011 NA non-coding downstream 2312 21079934 ~ 21080323 (+)
G954048 NA non-coding downstream 98287 21175909 ~ 21177113 (+)
G954059 NA non-coding downstream 122352 21199974 ~ 21203342 (+)
G954060 NA non-coding downstream 122437 21200059 ~ 21202150 (+)
phldb2b tcpe other upstream 1307846 19740565 ~ 19799150 (+)
G951511 NA other upstream 1950114 19126665 ~ 19127085 (+)
G948710 NA other upstream 4475307 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 4531910 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 4741907 16327393 ~ 16338373 (+)
tlcd4a LOC106570700 other downstream 1648931 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 2587666 23665288 ~ 23665930 (+)
G956797 NA other downstream 2698150 23775772 ~ 23776845 (+)
G957942 NA other downstream 3522849 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 3716978 24794600 ~ 24795736 (+)

Expression


Co-expression Network