Gene
RNA
| Item | Value |
|---|---|
| gene id | G954048 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 21175909 ~ 21177113 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1087814 | True | 752 | lncRNA | 0.44 | 2 | 21175909 | 21177113 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110535465 | LOC106578468 | coding | upstream | 26600 | 21131483 ~ 21149309 (+) |
| trpc1 | trpc1 | coding | upstream | 58847 | 21069765 ~ 21117062 (+) |
| cd226 | cd226 | coding | upstream | 342527 | 20821163 ~ 20833382 (+) |
| rttn | rttn | coding | upstream | 355360 | 20760571 ~ 20820549 (+) |
| cbln2b | cbln2 | coding | upstream | 676904 | 20495472 ~ 20499005 (+) |
| LOC110535467 | arhg4 | coding | downstream | 70710 | 21247823 ~ 21325738 (+) |
| fbxo45 | LOC106578473 | coding | downstream | 168363 | 21345476 ~ 21347872 (+) |
| nrros | LOC106578474 | coding | downstream | 174589 | 21351702 ~ 21357076 (+) |
| LOC110536585 | vav3 | coding | downstream | 246311 | 21423424 ~ 21550872 (+) |
| col11a1a | col11a1 | coding | downstream | 1038746 | 22215859 ~ 22304517 (+) |
| G954011 | NA | non-coding | upstream | 95586 | 21079934 ~ 21080323 (+) |
| G954009 | NA | non-coding | upstream | 98287 | 21077199 ~ 21077622 (+) |
| G954005 | NA | non-coding | upstream | 107234 | 21068454 ~ 21068675 (+) |
| G954003 | chst2 | non-coding | upstream | 109227 | 21064071 ~ 21066682 (+) |
| G953996 | NA | non-coding | upstream | 116180 | 21059420 ~ 21059729 (+) |
| G954059 | NA | non-coding | downstream | 22861 | 21199974 ~ 21203342 (+) |
| G954060 | NA | non-coding | downstream | 22946 | 21200059 ~ 21202150 (+) |
| G953832 | NA | non-coding | downstream | 121439 | 21298552 ~ 21408884 (+) |
| G954106 | NA | non-coding | downstream | 158050 | 21335163 ~ 21337132 (+) |
| phldb2b | tcpe | other | upstream | 1406556 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 2048824 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 4574017 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 4630620 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 4840617 | 16327393 ~ 16338373 (+) |
| tlcd4a | LOC106570700 | other | downstream | 1549440 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 2488175 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 2598659 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 3423358 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 3617487 | 24794600 ~ 24795736 (+) |
