Gene
RNA
| Item | Value |
|---|---|
| gene id | G954721 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 21618339 ~ 21625928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1088590 | True | 630 | lncRNA | 0.41 | 2 | 21618339 | 21625928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536585 | vav3 | coding | upstream | 67467 | 21423424 ~ 21550872 (+) |
| nrros | LOC106578474 | coding | upstream | 261263 | 21351702 ~ 21357076 (+) |
| fbxo45 | LOC106578473 | coding | upstream | 270467 | 21345476 ~ 21347872 (+) |
| LOC110535467 | arhg4 | coding | upstream | 292601 | 21247823 ~ 21325738 (+) |
| LOC110535465 | LOC106578468 | coding | upstream | 469030 | 21131483 ~ 21149309 (+) |
| col11a1a | col11a1 | coding | downstream | 589931 | 22215859 ~ 22304517 (+) |
| olfm3a | olfm3 | coding | downstream | 700161 | 22326089 ~ 22356408 (+) |
| LOC118937330 | NA | coding | downstream | 720065 | 22345993 ~ 22349256 (+) |
| LOC110535481 | LOC105022597 | coding | downstream | 766467 | 22392395 ~ 22405735 (+) |
| LOC110535485 | LOC106578486 | coding | downstream | 915671 | 22541599 ~ 22554183 (+) |
| G954728 | NA | non-coding | upstream | 3909 | 21613658 ~ 21614430 (+) |
| G954714 | NA | non-coding | upstream | 32046 | 21584438 ~ 21586293 (+) |
| G954710 | NA | non-coding | upstream | 40474 | 21577604 ~ 21577865 (+) |
| G954709 | NA | non-coding | upstream | 40798 | 21577135 ~ 21577541 (+) |
| G954212 | NA | non-coding | upstream | 65402 | 21544901 ~ 21552937 (+) |
| G955227 | NA | non-coding | downstream | 493102 | 22119030 ~ 22119341 (+) |
| G955230 | NA | non-coding | downstream | 497432 | 22123360 ~ 22123572 (+) |
| G955231 | NA | non-coding | downstream | 497898 | 22123826 ~ 22124579 (+) |
| G955235 | NA | non-coding | downstream | 505210 | 22131138 ~ 22131425 (+) |
| G955239 | NA | non-coding | downstream | 509594 | 22135522 ~ 22135757 (+) |
| phldb2b | tcpe | other | upstream | 1848986 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 2491254 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 5016447 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 5073050 | 16543682 ~ 16565783 (+) |
| LOC110535372 | mynn | other | upstream | 5283047 | 16327393 ~ 16338373 (+) |
| tlcd4a | LOC106570700 | other | downstream | 1100625 | 22712577 ~ 22741263 (+) |
| G956728 | LOC106613263 | other | downstream | 2039360 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 2149844 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 2974543 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 3168672 | 24794600 ~ 24795736 (+) |
