G955230


Basic Information

Item Value
gene id G955230
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 22123360 ~ 22123572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1089148
ctgtgcgaagttgctggatattggcaggaactggaacactctgtcgTGCATGTCGATCCAGAGAATCCCAAACGTGCGCGATGAGACACGGAtaccctaccggccaaaccctccctaacccggacgacgctaggccaattgtgcgtcgccccatggacctcccagtcgcggccggctgcgacagagcctgggctcgaacccagagtctctggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1089148 True 213 lncRNA 0.61 1 22123360 22123572

Neighbor

gene id symbol gene type direction distance location
LOC110536585 vav3 coding upstream 572488 21423424 ~ 21550872 (+)
nrros LOC106578474 coding upstream 766284 21351702 ~ 21357076 (+)
fbxo45 LOC106578473 coding upstream 775488 21345476 ~ 21347872 (+)
LOC110535467 arhg4 coding upstream 797622 21247823 ~ 21325738 (+)
LOC110535465 LOC106578468 coding upstream 974051 21131483 ~ 21149309 (+)
col11a1a col11a1 coding downstream 92287 22215859 ~ 22304517 (+)
olfm3a olfm3 coding downstream 202517 22326089 ~ 22356408 (+)
LOC118937330 NA coding downstream 222421 22345993 ~ 22349256 (+)
LOC110535481 LOC105022597 coding downstream 268823 22392395 ~ 22405735 (+)
LOC110535485 LOC106578486 coding downstream 418027 22541599 ~ 22554183 (+)
G955227 NA non-coding upstream 4019 22119030 ~ 22119341 (+)
G954719 NA non-coding upstream 464788 21591465 ~ 21658572 (+)
G954721 NA non-coding upstream 497432 21618339 ~ 21625928 (+)
G954728 NA non-coding upstream 508930 21613658 ~ 21614430 (+)
G954714 NA non-coding upstream 537067 21584438 ~ 21586293 (+)
G955231 NA non-coding downstream 254 22123826 ~ 22124579 (+)
G955235 NA non-coding downstream 7566 22131138 ~ 22131425 (+)
G955239 NA non-coding downstream 11950 22135522 ~ 22135757 (+)
G955329 NA non-coding downstream 88344 22211916 ~ 22212144 (+)
G955349 NA non-coding downstream 124572 22248144 ~ 22249314 (+)
phldb2b tcpe other upstream 2354007 19740565 ~ 19799150 (+)
G951511 NA other upstream 2996275 19126665 ~ 19127085 (+)
G948710 NA other upstream 5521468 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 5578071 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 5788068 16327393 ~ 16338373 (+)
tlcd4a LOC106570700 other downstream 602981 22712577 ~ 22741263 (+)
G956728 LOC106613263 other downstream 1541716 23665288 ~ 23665930 (+)
G956797 NA other downstream 1652200 23775772 ~ 23776845 (+)
G957942 NA other downstream 2476899 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 2671028 24794600 ~ 24795736 (+)

Expression


Co-expression Network