G955462


Basic Information

Item Value
gene id G955462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 22360201 ~ 22360521 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1089414
GAGCAGAAGTCCTGATTCCACATTAGTGAGAGGGAGCAGAAGTCCTGATTCCACATCAGTGAGAGGGAGCAGAAGTCCTGATTCCACATCAGTGAGAGGGAGCAGAAGCCCTGATTCCACATCAGTGAGAGGGAGCAGAAGCCCTGATTCCACATCAGTGAGAGGGAGCAGAAGCCCTGATTCCACGTCAGTGAGAGGGAGCAGAAGCCCTGATTCCACATC

Function

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1089414 True 222 lncRNA 0.53 2 22360201 22360521

Neighbor

gene id symbol gene type direction distance location
olfm3a olfm3 coding upstream 3793 22326089 ~ 22356408 (+)
LOC118937330 NA coding upstream 10945 22345993 ~ 22349256 (+)
col11a1a col11a1 coding upstream 55684 22215859 ~ 22304517 (+)
LOC110536585 vav3 coding upstream 809329 21423424 ~ 21550872 (+)
nrros LOC106578474 coding upstream 1003125 21351702 ~ 21357076 (+)
LOC110535481 LOC105022597 coding downstream 31874 22392395 ~ 22405735 (+)
LOC110535485 LOC106578486 coding downstream 181078 22541599 ~ 22554183 (+)
LOC110535486 LOC106578488 coding downstream 196588 22557109 ~ 22564107 (+)
tlcd4a LOC106570700 coding downstream 352056 22712577 ~ 22741263 (+)
LOC110535493 LOC106578494 coding downstream 390202 22750723 ~ 22756977 (+)
G955349 NA non-coding upstream 110887 22248144 ~ 22249314 (+)
G955329 NA non-coding upstream 148057 22211916 ~ 22212144 (+)
G955239 NA non-coding upstream 224444 22135522 ~ 22135757 (+)
G955235 NA non-coding upstream 228776 22131138 ~ 22131425 (+)
G955231 NA non-coding upstream 235622 22123826 ~ 22124579 (+)
G955463 NA non-coding downstream 1155 22361676 ~ 22361893 (+)
G955481 NA non-coding downstream 34208 22394729 ~ 22454322 (+)
G955488 NA non-coding downstream 46142 22406663 ~ 22407684 (+)
G955490 LOC108412106 non-coding downstream 47793 22408314 ~ 22413868 (+)
G955498 LOC104966354 non-coding downstream 60292 22420813 ~ 22423206 (+)
phldb2b tcpe other upstream 2590848 19740565 ~ 19799150 (+)
G951511 NA other upstream 3233116 19126665 ~ 19127085 (+)
G948710 NA other upstream 5758309 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 5814912 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 6024909 16327393 ~ 16338373 (+)
G956728 LOC106613263 other downstream 1304767 23665288 ~ 23665930 (+)
G956797 NA other downstream 1415251 23775772 ~ 23776845 (+)
G957942 NA other downstream 2239950 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 2434079 24794600 ~ 24795736 (+)

Expression


Co-expression Network