XLOC_028665 (mest)


Basic Information

Item Value
gene id XLOC_028665
gene name mest
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 15996234 ~ 16001215 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055580
AACAGCACATGTTTCAGCCCATCAGGATAAACAACCGATTCACACTGCGATAAAGTGCAGAGATCGAGAATGTCAGGCGACTCACCTCAGAATGACAGTGAGTGTGGGTCAGCTCGTCGTGTGAGCAGAGAATGGTGGCTTCACGTGGGTTTGTTGTGTGTTCCTCTGCTCGCCGTGTATCTGCACATCCCTCCGCCACAGCTGTCACCTGCGCTTAACAGCTGGCGCACTTCCGGTCACTTCTTCACATTCAGAGGCAATGACATCTTCTATAAAGAGTCAGTTGGAGTTGTGGGAAGCTCTGATGTCCTTGTGTTGCTTCATGGCTTTCCTACGTCAAGCTATGACTGGTATAAGATCTGGGATTCTCTGACGCAGCGCTTCAATAGAGTCATCGCCCTTGACTTCCTGGGCTTCGGTTTTTCTGACAAACCGAGGCCGCACCGGTACTCCATCTTCGAGCAGGCCAGTGTTGTGGAAGCTCTAGTTGCCCATTTGGGTTTGTCAGAGCAGAGGATCAACATCCTATCACACGACTACGGAGACACTGTTGCTCTCGAGTTACTGTACAGGAGTGACCACAACAGAAGCGGACACATCATTGTAAACAGCCTCTGCCTATCAAATGGAGGTATATTCCCAGAGACTCATCATCCAAGATTCCTTCAGAAAGTGCTGAAGGACTCCGGCTTTATTTCACCTGTACTCACTCGTCTGATGAACTTCCAGCTTTTCTCCAGAGGAATTAAGGAAGTGTTTGGACCGTACACCCAGCCAACAGAAGCAGAAGTCTGGGACATGTGGACAGGCATTCGCTTTAATGATGGAAATCTTGTAATGGACAGTCTTTTGCAATACATTAACCAGaggctgaaacacagagaacgATGGGTGGGCGCTCTAACTTCGACTTTAACACCCCTGCACATGATTTATGGACCCCTAGATCCAGTTAATCCACATCCGCAGTTTCTGCAGCTTTACCAGAAACTAGTGCAGAGATCCACAGTATCTGTTCTAGATGAGCACGTGAGTCATTATCCACAGCTGGAGGATCCCACAGGATTCTTTAATGCCTATCTCAGCTTTATCAACTCATTCTAAGCCGGGGGATGATCGGATCATTCTGAAGCGAGAAATAAAGTGAAATTATGTTCCAAATAAGGTTGAAAACATACAAACCCATTAATATACCGCAAAGTATTTCTGATGCAAGTCATGTGACTGAATGCATGAAGTATTGCACCAAATGCCCAATCATTGCAAGTACTTGTTAATGAATTTGCTCATATTGTATGCCATAACTTGTAAATACATTTGTGTAACAAACATGAATGCTTTTTttggaaataataaataattcttattATA
>TCONS_00055581
TTTTCAGCCTGAGACCTTTGGATCCTTAGCAACCCGACGCCTGCTCACAGCCAGTTTTAAGGAATGACAGCTGAGTGACAGACTCTTAATGTCACTCAACAGCACATGTTTCAGCCCATCAGGATAAACAACCGATTCACACTGCGATAAAGTGCAGAGATCGAGAATGTCAGGCGACTCACCTAATGACAGTGAGTGTGGGTCAGCTCGTCGTGTGAGCAGAGAATGGTGGCTTCACGTGGGTTTGTTGTGTGTTCCTCTGCTCGCCGTGTATCTGCACATCCCTCCGCCACAGCTGTCACCTGCGCTTAACAGCTGGCGCACTTCCGGTCACTTCTTCACATTCAGAGGCAATGACATCTTCTATAAAGAGTCAGTTGGAGTTGTGGGAAGCTCTGATGTCCTTGTGTTGCTTCATGGCTTTCCTACGTCAAGCTATGACTGGTATAAGATCTGGGATTCTCTGACGCAGCGCTTCAATAGAGTCATCGCCCTTGACTTCCTGGGCTTCGGTTTTTCTGACAAACCGAGGCCGCACCGGTACTCCATCTTCGAGCAGGCCAGTGTTGTGGAAGCTCTAGTTGCCCATTTGGGTTTGTCAGAGCAGAGGATCAACATCCTATCACACGACTACGGAGACACTGTTGCTCTCGAGTTACTGTACAGGAGTGACCACAACAGAAGCGGACACATCATTGTAAACAGCCTCTGCCTATCAAATGGAGGTATATTCCCAGAGACTCATCATCCAAGATTCCTTCAGAAAGTGCTGAAGGACTCCGGCTTTATTTCACCTGTACTCACTCGTCTGATGAACTTCCAGCTTTTCTCCAGAGGAATTAAGGAAGTGTTTGGACCGTACACCCAGCCAACAGAAGCAGAAGTCTGGGACATGTGGACAGGCATTCGCTTTAATGATGGAAATCTTGTAATGGACAGTCTTTTGCAATACATTAACCAGaggctgaaacacagagaacgATGGGTGGGCGCTCTAACTTCGACTTTAACACCCCTGCACATGATTTATGGACCCCTAGATCCAGTTAATCCACATCCGCAGTTTCTGCAGCTTTACCAGAAACTAGTGCAGAGATCCACAGTATCTGTTCTAGATGAGCACGTGAGTCATTATCCACAGCTGGAGGATCCCACAGGATTCTTTAATGCCTATCTCAGCTTTATCAACTCATTCTAAGCCGGGGGATGATCGGATCATTCTGAAGCGAGAAATAAAGTGAAATTATGTTCCAAATAAGGTTGAAAACATACAAACCCATTAATATACCGCAAAGTATTTCTGATGCAAGTCATGTGACTGAATGCATGAAGTATTGCACCAAATGCCCAATCATTGCAAGTACTTGTTAATGAATTTGCTCATATTGTATGCCATAACTTGTAAATACATTTGTGTAACAAACATGAATGCTTTTTttggaaataataaataattcttattATA

Function

symbol description
mest Predicted to enable catalytic activity. Predicted to be involved in regulation of lipid storage. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human MEST (mesoderm specific transcript).

GO:

id name namespace
GO:0010883 regulation of lipid storage biological_process
GO:0005783 endoplasmic reticulum cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0003824 catalytic activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-991111-5 Predicted to enable catalytic activity. Predicted to be involved in regulation of lipid storage. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum. Orthologous to human MEST (mesoderm specific transcript).

Ensembl:

ensembl_id ENSDARG00000032319

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055580 False 1371 mRNA 0.45 12 15996234 16001118
TCONS_00055581 True 1465 mRNA 0.45 12 15996234 16001215

Neighbor

gene id symbol gene type direction distance location
XLOC_028664 NA coding downstream 22087 15913165 ~ 15974147 (-)
XLOC_028663 NA coding downstream 235643 15757435 ~ 15760591 (-)
XLOC_028662 chchd3a coding downstream 392646 15490215 ~ 15603588 (-)
XLOC_028661 NA coding downstream 524040 15469287 ~ 15472194 (-)
XLOC_028660 NA coding downstream 541569 15444352 ~ 15454665 (-)
XLOC_028666 NA coding upstream 2685 16003900 ~ 16025255 (-)
XLOC_028667 NA coding upstream 33082 16034297 ~ 16037857 (-)
XLOC_028668 NA coding upstream 38899 16040114 ~ 16042181 (-)
XLOC_028669 NA coding upstream 40340 16041555 ~ 16075501 (-)
XLOC_028670 atp2b1a coding upstream 75504 16076719 ~ 16124419 (-)
XLOC_028658 NA non-coding downstream 789831 15201109 ~ 15206403 (-)
XLOC_028671 NA non-coding upstream 126458 16127673 ~ 16192183 (-)

Expression


Co-expression Network