G955531


Basic Information

Item Value
gene id G955531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 22478451 ~ 22481603 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1089499
cttgcctagttaaatacatttttaaaaatatatataaatgggTTAGTTGTTCAGAAGTGGTtaactctggataagagcgtctactaATTGACAAAAATGTCACCGTAAATGTTAACTTGATTGTGTATTTCAGTAACCCTAGGCCTCAAGCTTTGGGCCTCAGTGGGTAACTATGGGCTTAAAGGATGAGATATGTGTTTCAGGGATGATCTATGGGCCTCACGGATGGGCTATGGGCCTCAGAGATGACATGGATGAGCTATGGGCCTCAGACATGACATGGATGAGCTATAAACCTTAGGGACAAGATATTTTACCTTCTGCAGAGCCTCCTCCTCCAGCCTTCGTCTCTTCTCCAGCTTGGCTGCTCCCAGCTGCTCCTCCTCTACTCGGCTGGTGGACACCCGGGCCTTCTCATACTCCTCCTGTCTCTGGGCTTGCAGAACACGGGCCTTCCTCAGGGCACTATCCGCCTCATGCTGAAAATACACACAGCATTAACACAAGGGAAACACGAGGCAAACAAATACACTAAACAACATACATGTACGCACACAAACATGTCTGTTACAAAATGATTGACTCAGCCCTGATCACTGTTAACTTTTCAACCAAATTTTCTCTCACACTGCAAAGGCAAAACATGGTTCCACAACACACAAAGGAAACACAAATCAACTGTCCTTAGAGATACAGTACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTCAGAGTTACACACTAACCAACCCAGTCCTTAGAGATACACACGAACCAACCCAGTCCTTAGAGATACACACTAACAAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACAGTACATACTAACCAACCCAGTCCTTAGAGATACACACTAAACAACCCAGTCCTTAAGAGATACATACTAACCAACCCAGTCCTTAGAGATACAGTACATACTAACCAACCCAATCCTTAGAGATACAGTACATACTAACCAACCCAGTCCCTAGAGATGCACACTAACCAACCCAGTCCTTAGAGATACACACAAACCAACCCAGTCCTTAGAGATACACACTAACAAACCCAGTCCTTAGAGAAACATACTAACCAACCCAGTCCTTAGAGATACACACTAAACAACCCAGTCCTTAAGAGATACATACTAACCAACCCAGTCCTTAGAGATACATACTAACCAACCCAGTCCTTAGAGATACAGCACATACTAACCAACCCAGTCCTTAAGAGTTACACACTAACCAACCCAGTCCTTAGAGTTACACACTAACCAACCCAGTCCCTATAGTTACACACTAACCAACCCAGTCCTTAGAGATACTGTACATACTAACCAACCCAGTCCTTAGAGTTACACACTAACCAACCCAGTCCTTAGAGATACATACTAACCAACCCAGTCCTTAGAGATACATACTAACCCACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAAGATACACACTAACCAACCCAGTCCTTAGAGATACAGTACATACTAACCAACCCAGTCCTAGGAGATACATACTAACCAACCCAGTCCTTAGAGATACATACTAACCAACCTCGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACAGTACATACTAACCAACCCAGTCCTTAGAGATACAGTACATAATAACCCACCCAGTCCTTAGTGATACACACTAACCAATCCAGTCCTTAGAGATACATACTAATCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTCAGAGATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAATCCTTAGAAATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCCTTAGAGATACACACTAACCAACCCAGTCGTTAGAGTTACACACTAACCAACCCAGTCCTTGGAGATACACACTAACCAACCCAGTCCTTAGAGTTACACACTAACCAACCCAGTCCTTAGAGATACATACTAACCAACCCAATCCTTAGAGATACA

Function

NR:

description
rho GTPase-activating protein 29-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1089499 True 2163 lncRNA 0.44 5 22478451 22481603

Neighbor

gene id symbol gene type direction distance location
LOC110535481 LOC105022597 coding upstream 72716 22392395 ~ 22405735 (+)
olfm3a olfm3 coding upstream 122043 22326089 ~ 22356408 (+)
LOC118937330 NA coding upstream 129195 22345993 ~ 22349256 (+)
col11a1a col11a1 coding upstream 173934 22215859 ~ 22304517 (+)
LOC110536585 vav3 coding upstream 927579 21423424 ~ 21550872 (+)
LOC110535485 LOC106578486 coding downstream 59996 22541599 ~ 22554183 (+)
LOC110535486 LOC106578488 coding downstream 75506 22557109 ~ 22564107 (+)
tlcd4a LOC106570700 coding downstream 230974 22712577 ~ 22741263 (+)
LOC110535493 LOC106578494 coding downstream 269120 22750723 ~ 22756977 (+)
ptbp2a ptbp2 coding downstream 469558 22951161 ~ 22966803 (+)
G955481 NA non-coding upstream 24129 22394729 ~ 22454322 (+)
G955501 LOC108235267 non-coding upstream 52166 22424931 ~ 22426285 (+)
G955498 LOC104966354 non-coding upstream 55245 22420813 ~ 22423206 (+)
G955490 LOC108412106 non-coding upstream 64583 22408314 ~ 22413868 (+)
G955488 NA non-coding upstream 70767 22406663 ~ 22407684 (+)
G955585 NA non-coding downstream 78863 22560466 ~ 22561104 (+)
G955575 NA non-coding downstream 90330 22571933 ~ 22626610 (+)
G955741 NA non-coding downstream 346402 22828005 ~ 22828323 (+)
G955785 NA non-coding downstream 411477 22893080 ~ 22976240 (+)
G955814 NA non-coding downstream 498530 22980133 ~ 22980463 (+)
phldb2b tcpe other upstream 2709098 19740565 ~ 19799150 (+)
G951511 NA other upstream 3351366 19126665 ~ 19127085 (+)
G948710 NA other upstream 5876559 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 5933162 16543682 ~ 16565783 (+)
LOC110535372 mynn other upstream 6143159 16327393 ~ 16338373 (+)
G956728 LOC106613263 other downstream 1183685 23665288 ~ 23665930 (+)
G956797 NA other downstream 1294169 23775772 ~ 23776845 (+)
G957942 NA other downstream 2118868 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 2312997 24794600 ~ 24795736 (+)

Expression


Co-expression Network