G955741


Basic Information

Item Value
gene id G955741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 22828005 ~ 22828323 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1089725
CTCCAATATTAACGCCCAAAACAACATCCGAATAATCAAAAATTGTCCAACCCAACACAGGGcacaaacagacaggaacactacacACAACAACCTGGACTGacagaaaacaagcccgcacaaaaacagAGACAGGTACAAccaaaaagacaaaacaaacagaaaaggaaaaggggatcggtggcagctagtagaccggcgacgacgaccgccgagcgccacccgaacaggaagaggagccaccttcggtgggagtcgtgacagagtacttatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562530

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1089725 True 274 lncRNA 0.49 2 22828005 22828323

Neighbor

gene id symbol gene type direction distance location
LOC110535493 LOC106578494 coding upstream 71028 22750723 ~ 22756977 (+)
tlcd4a LOC106570700 coding upstream 86742 22712577 ~ 22741263 (+)
LOC110535486 LOC106578488 coding upstream 263898 22557109 ~ 22564107 (+)
LOC110535485 LOC106578486 coding upstream 273822 22541599 ~ 22554183 (+)
LOC110535481 LOC105022597 coding upstream 422270 22392395 ~ 22405735 (+)
ptbp2a ptbp2 coding downstream 122838 22951161 ~ 22966803 (+)
snx7 snx7 coding downstream 501427 23329750 ~ 23365999 (+)
LOC110535498 NA coding downstream 553206 23381529 ~ 23387901 (+)
LOC118937334 NA coding downstream 646812 23475135 ~ 23477150 (+)
LOC110535500 LOC106578508 coding downstream 666586 23494909 ~ 23531354 (+)
G955575 NA non-coding upstream 201395 22571933 ~ 22626610 (+)
G955585 NA non-coding upstream 266901 22560466 ~ 22561104 (+)
G955531 NA non-coding upstream 346402 22478451 ~ 22481603 (+)
G955501 LOC108235267 non-coding upstream 401720 22424931 ~ 22426285 (+)
G955498 LOC104966354 non-coding upstream 404799 22420813 ~ 22423206 (+)
G955785 NA non-coding downstream 64757 22893080 ~ 22976240 (+)
G955814 NA non-coding downstream 151810 22980133 ~ 22980463 (+)
G955830 NA non-coding downstream 179337 23007660 ~ 23064013 (+)
G955854 NA non-coding downstream 225794 23054117 ~ 23073461 (+)
G955919 NA non-coding downstream 351651 23179974 ~ 23184228 (+)
phldb2b tcpe other upstream 3058652 19740565 ~ 19799150 (+)
G951511 NA other upstream 3700920 19126665 ~ 19127085 (+)
G948710 NA other upstream 6226113 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 6282716 16543682 ~ 16565783 (+)
G956728 LOC106613263 other downstream 836965 23665288 ~ 23665930 (+)
G956797 NA other downstream 947449 23775772 ~ 23776845 (+)
G957942 NA other downstream 1772148 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1966277 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3885302 26713625 ~ 26797294 (+)

Expression


Co-expression Network