G956494


Basic Information

Item Value
gene id G956494
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23271444 ~ 23271804 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090534
ATACAAGACATCCCTGATCATAATACAATACATCCctgatcacaatataatacatCCCTGACCATAATACAATAAATCCctgatcacaatataatacatCCCTGACCATAATACAATACATCCCTGACCATAATACAATACATCCCTgatcataatataatacatccCTGATCACATTATAATACATCCCTGATCATAATACAATACATCCCTGACCATAATACAATACATCCctgatcacaatataatacatCCCTGACCATAATATAATACATCCCTGACCATAATACAATACATCCctgatcacaatataatacatCCCTGACCATAATACAAGACATCCCTGATCATAATACAATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090534 True 361 lncRNA 0.33 1 23271444 23271804

Neighbor

gene id symbol gene type direction distance location
ptbp2a ptbp2 coding upstream 304641 22951161 ~ 22966803 (+)
LOC110535493 LOC106578494 coding upstream 514467 22750723 ~ 22756977 (+)
tlcd4a LOC106570700 coding upstream 530181 22712577 ~ 22741263 (+)
LOC110535486 LOC106578488 coding upstream 707337 22557109 ~ 22564107 (+)
LOC110535485 LOC106578486 coding upstream 717261 22541599 ~ 22554183 (+)
snx7 snx7 coding downstream 57946 23329750 ~ 23365999 (+)
LOC110535498 NA coding downstream 109725 23381529 ~ 23387901 (+)
LOC118937334 NA coding downstream 203331 23475135 ~ 23477150 (+)
LOC110535500 LOC106578508 coding downstream 223105 23494909 ~ 23531354 (+)
palmdb LOC106578510 coding downstream 291871 23563675 ~ 23604917 (+)
G956485 NA non-coding upstream 9586 23261656 ~ 23261858 (+)
G956484 NA non-coding upstream 10078 23261142 ~ 23261366 (+)
G956480 NA non-coding upstream 15048 23256033 ~ 23256396 (+)
G956465 NA non-coding upstream 23717 23247433 ~ 23247727 (+)
G955919 NA non-coding upstream 87216 23179974 ~ 23184228 (+)
G956496 NA non-coding downstream 544 23272348 ~ 23275299 (+)
G956497 NA non-coding downstream 4578 23276382 ~ 23276597 (+)
G956498 NA non-coding downstream 5400 23277204 ~ 23277648 (+)
G956507 NA non-coding downstream 11553 23283357 ~ 23283565 (+)
G956564 NA non-coding downstream 87097 23358901 ~ 23359868 (+)
phldb2b tcpe other upstream 3502091 19740565 ~ 19799150 (+)
G951511 NA other upstream 4144359 19126665 ~ 19127085 (+)
G948710 NA other upstream 6669552 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 6726155 16543682 ~ 16565783 (+)
G956728 LOC106613263 other downstream 393484 23665288 ~ 23665930 (+)
G956797 NA other downstream 503968 23775772 ~ 23776845 (+)
G957942 NA other downstream 1328667 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1522796 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3441821 26713625 ~ 26797294 (+)

Expression


Co-expression Network