XLOC_028668


Basic Information

Item Value
gene id XLOC_028668
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 16040114 ~ 16042181 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055584
CAAAGCCGCAGACGCCGCCTAGTGGAGCGGAAGTGAATCAGTGTCAGTAGTTTTAATGCATGAAAACAAACTAGAAGTGTGTCGTTGGAGACGGGATGcgtttttagttttatatatattaaatcacGTCTGTGATCTTCTTTAAATGGTCTCGAGCAGCAGATAAACATGGCATCTAACGGATGATCAGCTTCTCAACTGAAGGGGATAAGGTTGTTTGGAGCCTCACACTCATCCAGCAGAAGCATGTGGACAGAAATTGACAGTAATGATGCTCATCTGCTAAAGGACATGTCAGACTTTTCACTGCGCCTTTTTCACAGATG

Function

GO:

id name namespace
GO:0098534 centriole assembly biological_process
GO:0007099 centriole replication biological_process
GO:0098536 deuterosome cellular_component

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055584 True 326 lncRNA 0.43 2 16040114 16042181

Neighbor

gene id symbol gene type direction distance location
XLOC_028667 NA coding downstream 2257 16034297 ~ 16037857 (-)
XLOC_028666 NA coding downstream 14859 16003900 ~ 16025255 (-)
XLOC_028665 mest coding downstream 38899 15996234 ~ 16001215 (-)
XLOC_028664 NA coding downstream 65967 15913165 ~ 15974147 (-)
XLOC_028663 NA coding downstream 279523 15757435 ~ 15760591 (-)
XLOC_028670 atp2b1a coding upstream 34538 16076719 ~ 16124419 (-)
XLOC_028671 NA coding upstream 85492 16127673 ~ 16192183 (-)
XLOC_028672 BX649423.3 coding upstream 171243 16213424 ~ 16213540 (-)
XLOC_028673 NA coding upstream 253343 16295524 ~ 16313944 (-)
XLOC_028674 NA coding upstream 257475 16299656 ~ 16301242 (-)
XLOC_028661 NA non-coding downstream 567920 15469287 ~ 15472194 (-)
XLOC_028684 NA non-coding upstream 721524 16763705 ~ 16824556 (-)

Expression


Co-expression Network