G956497


Basic Information

Item Value
gene id G956497
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23276382 ~ 23276597 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090554
TCCAGATATATATTAAGAAACTGTTATTCCCGACTTCACCGTTCAACCCTTAAAAAATGTGTATGTCTGACAATTACATTATGCATGACTGCCAGGATGAAATTCATACCAGAACTAATGATGGAAAAAGGAAAGCATTTAGACAGTTAACCACTGAAATAATCAAAGCAACCAATttgaagatttaaaaaaatagatCATTACAATCCACTCTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090554 True 216 lncRNA 0.32 1 23276382 23276597

Neighbor

gene id symbol gene type direction distance location
ptbp2a ptbp2 coding upstream 309579 22951161 ~ 22966803 (+)
LOC110535493 LOC106578494 coding upstream 519405 22750723 ~ 22756977 (+)
tlcd4a LOC106570700 coding upstream 535119 22712577 ~ 22741263 (+)
LOC110535486 LOC106578488 coding upstream 712275 22557109 ~ 22564107 (+)
LOC110535485 LOC106578486 coding upstream 722199 22541599 ~ 22554183 (+)
snx7 snx7 coding downstream 53153 23329750 ~ 23365999 (+)
LOC110535498 NA coding downstream 104932 23381529 ~ 23387901 (+)
LOC118937334 NA coding downstream 198538 23475135 ~ 23477150 (+)
LOC110535500 LOC106578508 coding downstream 218312 23494909 ~ 23531354 (+)
palmdb LOC106578510 coding downstream 287078 23563675 ~ 23604917 (+)
G956496 NA non-coding upstream 1083 23272348 ~ 23275299 (+)
G956494 NA non-coding upstream 4578 23271444 ~ 23271804 (+)
G956485 NA non-coding upstream 14524 23261656 ~ 23261858 (+)
G956484 NA non-coding upstream 15016 23261142 ~ 23261366 (+)
G956480 NA non-coding upstream 19986 23256033 ~ 23256396 (+)
G956498 NA non-coding downstream 607 23277204 ~ 23277648 (+)
G956507 NA non-coding downstream 6760 23283357 ~ 23283565 (+)
G956564 NA non-coding downstream 82304 23358901 ~ 23359868 (+)
G956569 NA non-coding downstream 93720 23370317 ~ 23370563 (+)
phldb2b tcpe other upstream 3507029 19740565 ~ 19799150 (+)
G951511 NA other upstream 4149297 19126665 ~ 19127085 (+)
G948710 NA other upstream 6674490 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 6731093 16543682 ~ 16565783 (+)
G956728 LOC106613263 other downstream 388691 23665288 ~ 23665930 (+)
G956797 NA other downstream 499175 23775772 ~ 23776845 (+)
G957942 NA other downstream 1323874 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1518003 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3437028 26713625 ~ 26797294 (+)

Expression


Co-expression Network