Gene
RNA
| Item | Value |
|---|---|
| gene id | G956498 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23277204 ~ 23277648 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1090555 | True | 445 | lncRNA | 0.40 | 1 | 23277204 | 23277648 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptbp2a | ptbp2 | coding | upstream | 310401 | 22951161 ~ 22966803 (+) |
| LOC110535493 | LOC106578494 | coding | upstream | 520227 | 22750723 ~ 22756977 (+) |
| tlcd4a | LOC106570700 | coding | upstream | 535941 | 22712577 ~ 22741263 (+) |
| LOC110535486 | LOC106578488 | coding | upstream | 713097 | 22557109 ~ 22564107 (+) |
| LOC110535485 | LOC106578486 | coding | upstream | 723021 | 22541599 ~ 22554183 (+) |
| snx7 | snx7 | coding | downstream | 52102 | 23329750 ~ 23365999 (+) |
| LOC110535498 | NA | coding | downstream | 103881 | 23381529 ~ 23387901 (+) |
| LOC118937334 | NA | coding | downstream | 197487 | 23475135 ~ 23477150 (+) |
| LOC110535500 | LOC106578508 | coding | downstream | 217261 | 23494909 ~ 23531354 (+) |
| palmdb | LOC106578510 | coding | downstream | 286027 | 23563675 ~ 23604917 (+) |
| G956497 | NA | non-coding | upstream | 607 | 23276382 ~ 23276597 (+) |
| G956496 | NA | non-coding | upstream | 1905 | 23272348 ~ 23275299 (+) |
| G956494 | NA | non-coding | upstream | 5400 | 23271444 ~ 23271804 (+) |
| G956485 | NA | non-coding | upstream | 15346 | 23261656 ~ 23261858 (+) |
| G956484 | NA | non-coding | upstream | 15838 | 23261142 ~ 23261366 (+) |
| G956507 | NA | non-coding | downstream | 5709 | 23283357 ~ 23283565 (+) |
| G956564 | NA | non-coding | downstream | 81253 | 23358901 ~ 23359868 (+) |
| G956569 | NA | non-coding | downstream | 92669 | 23370317 ~ 23370563 (+) |
| G956597 | NA | non-coding | downstream | 134677 | 23412325 ~ 23416289 (+) |
| phldb2b | tcpe | other | upstream | 3507851 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4150119 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 6675312 | 16554200 ~ 16601892 (+) |
| LOC110535387 | LOC106579475 | other | upstream | 6731915 | 16543682 ~ 16565783 (+) |
| G956728 | LOC106613263 | other | downstream | 387640 | 23665288 ~ 23665930 (+) |
| G956797 | NA | other | downstream | 498124 | 23775772 ~ 23776845 (+) |
| G957942 | NA | other | downstream | 1322823 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 1516952 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 3435977 | 26713625 ~ 26797294 (+) |
