G956904


Basic Information

Item Value
gene id G956904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23340221 ~ 23341323 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090998
GTGAGATTGACATAATATTGACAGAGATAGATTATGTCAGAGACAGATACTGTATCCTATCCTTTCCATTGTAACAATAACATGTGCTCTAGACTAGAACATTCCACTGTCACCAAGTTACAGAAATGGCTTTCATGTCACATTGACCTTGAATTAAATGTTGTTCCACAAACTCAAAGAGCACACCAAGCGCCTGATCAGATGAGAAAAATCCCCTTCAACCTAAAACACAATCCAGTGGTGGTCTCCCTGTTCTCATTGAGGCCAAGGCCTAACGTTATGTCCTGACACAAGAGTATAAGATGCGTTGGCTAAACTTGATCGTCTTAAGAACAGCGCCCAGACTTCTAACTGATTACTTTCCCCGTGTCAGGGATACACACAATCACAGCATCAGATCAGGTGTGCTTAGAAAGCtactttcttgtatactggagcctTAAGAGtggaatgagttgcctctgcccataaaaaaaaaaaaaaacatcctctcTGGGCATCTTTGAAAATTAAGTTGTTAAAAAACTGTTTGATGTCTTCTGTGCCCATATGAATGACCCCTATGATGTTACTGCAATGAGATAgatatttgttttattatctcGTGGTCAATGTGTTCAACCGTGTTGGATCTTGCCTAGCAGTCTTGTTACAAGACCACAATGGGAGTCCCAGACTTTATTATGTGTTCTCCACCATGATGTAACAATgggaataagtcccagactttattatGTGTTATCCACCATGATGTAACAATgggaataagtcccagactttattatGTGTTATCCACCATGATGTAACAATGGGAATAAGGTCCAGACTTTTATTATGTGTTATCCACCATGATGTAACAATGGGAGTCCCAGACTTTATTATGTGTTCTCCACCATGATGTAACAATGGGAATAAGGTCCAGACTTTATTATGTGTTCTCCACCATGATGTAACAATgggaataagtcccagactttattatGTGTTATCCACCATGATGTAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090998 True 1006 lncRNA 0.39 2 23340221 23341323
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937332 NA coding downstream 63175 23272776 ~ 23277046 (-)
LOC110535495 LOC106578501 coding downstream 93994 23028826 ~ 23246227 (-)
LOC110535490 LOC106578491 coding downstream 654425 22669966 ~ 22685796 (-)
LOC110535489 LOC106578489 coding downstream 711363 22622607 ~ 22628858 (-)
f3a LOC106578489 coding downstream 766494 22564042 ~ 22573727 (-)
LOC110535499 LOC106578506 coding upstream 45964 23387287 ~ 23491648 (-)
frrs1b frrs1 coding upstream 263597 23604920 ~ 23650700 (-)
neurod6a neurod6 coding upstream 360525 23701848 ~ 23705346 (-)
LOC110535511 pde1c coding upstream 425026 23766349 ~ 23880905 (-)
LOC110536587 pde1c coding upstream 539053 23880376 ~ 23930851 (-)
G956511 NA non-coding downstream 53490 23286512 ~ 23286731 (-)
G956495 NA non-coding downstream 68303 23271664 ~ 23271918 (-)
G956477 NA non-coding downstream 85800 23254200 ~ 23254421 (-)
G956466 NA non-coding downstream 92031 23247944 ~ 23248190 (-)
G956931 NA non-coding upstream 29008 23370331 ~ 23370643 (-)
G956937 NA non-coding upstream 34297 23375620 ~ 23375849 (-)
G956938 NA non-coding upstream 34699 23376022 ~ 23376268 (-)
G956945 NA non-coding upstream 43929 23385252 ~ 23386955 (-)
G956982 NA non-coding upstream 91498 23432821 ~ 23440369 (-)
G956366 NA other downstream 296236 23007150 ~ 23043985 (-)
G956234 LOC106578494 other downstream 583248 22753280 ~ 22756973 (-)
G954919 NA other downstream 1760393 21579583 ~ 21579828 (-)
G954484 arhgef4 other downstream 2086912 21246014 ~ 21253309 (-)
G954441 NA other downstream 2261563 21077650 ~ 21078658 (-)
G957170 NA other upstream 382656 23723979 ~ 23724418 (-)
G957157 LOC106578515 other upstream 405157 23746480 ~ 23748084 (-)
G957684 NA other upstream 901399 24242722 ~ 24243309 (-)
G958140 NA other upstream 1112325 24453648 ~ 24454119 (-)
G958191 NA other upstream 1191681 24533004 ~ 24533544 (-)

Expression

G956904 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.25.
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G956904 Expression in each Bioproject

Bar chart with 11 bars.
G956904 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
End of interactive chart.

Co-expression Network