Gene
RNA
| Item | Value |
|---|---|
| gene id | G956945 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23385252 ~ 23386955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1091043 | False | 1678 | lncRNA | 0.34 | 2 | 23385252 | 23386955 |
| TU1091046 | False | 1678 | lncRNA | 0.34 | 2 | 23385252 | 23386955 |
| TU1091054 | True | 1678 | lncRNA | 0.34 | 2 | 23385252 | 23386955 |
23,382,800
23,383,200
23,383,600
23,384,000
23,384,400
23,384,800
23,385,200
23,385,600
23,386,000
23,386,400
23,386,800
23,387,200
23,387,600
23,388,000
23,388,400
23,388,800
23,389,200
23,389,600
23,390,000
23,390,400
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937332 | NA | coding | downstream | 108206 | 23272776 ~ 23277046 (-) |
| LOC110535495 | LOC106578501 | coding | downstream | 139025 | 23028826 ~ 23246227 (-) |
| LOC110535490 | LOC106578491 | coding | downstream | 699456 | 22669966 ~ 22685796 (-) |
| LOC110535489 | LOC106578489 | coding | downstream | 756394 | 22622607 ~ 22628858 (-) |
| f3a | LOC106578489 | coding | downstream | 811525 | 22564042 ~ 22573727 (-) |
| LOC110535499 | LOC106578506 | coding | upstream | 332 | 23387287 ~ 23491648 (-) |
| frrs1b | frrs1 | coding | upstream | 217965 | 23604920 ~ 23650700 (-) |
| neurod6a | neurod6 | coding | upstream | 314893 | 23701848 ~ 23705346 (-) |
| LOC110535511 | pde1c | coding | upstream | 379394 | 23766349 ~ 23880905 (-) |
| LOC110536587 | pde1c | coding | upstream | 493421 | 23880376 ~ 23930851 (-) |
| G956938 | NA | non-coding | downstream | 8984 | 23376022 ~ 23376268 (-) |
| G956937 | NA | non-coding | downstream | 9403 | 23375620 ~ 23375849 (-) |
| G956931 | NA | non-coding | downstream | 14609 | 23370331 ~ 23370643 (-) |
| G956904 | NA | non-coding | downstream | 43929 | 23340221 ~ 23341323 (-) |
| G956511 | NA | non-coding | downstream | 98521 | 23286512 ~ 23286731 (-) |
| G956982 | NA | non-coding | upstream | 45866 | 23432821 ~ 23440369 (-) |
| G957028 | NA | non-coding | upstream | 107740 | 23494695 ~ 23494897 (-) |
| G957059 | NA | non-coding | upstream | 150329 | 23537284 ~ 23537520 (-) |
| G957060 | NA | non-coding | upstream | 153360 | 23540315 ~ 23540577 (-) |
| G957092 | NA | non-coding | upstream | 234530 | 23621485 ~ 23661524 (-) |
| G956366 | NA | other | downstream | 341267 | 23007150 ~ 23043985 (-) |
| G956234 | LOC106578494 | other | downstream | 628279 | 22753280 ~ 22756973 (-) |
| G954919 | NA | other | downstream | 1805424 | 21579583 ~ 21579828 (-) |
| G954484 | arhgef4 | other | downstream | 2131943 | 21246014 ~ 21253309 (-) |
| G954441 | NA | other | downstream | 2306594 | 21077650 ~ 21078658 (-) |
| G957170 | NA | other | upstream | 337024 | 23723979 ~ 23724418 (-) |
| G957157 | LOC106578515 | other | upstream | 359525 | 23746480 ~ 23748084 (-) |
| G957684 | NA | other | upstream | 855767 | 24242722 ~ 24243309 (-) |
| G958140 | NA | other | upstream | 1066693 | 24453648 ~ 24454119 (-) |
| G958191 | NA | other | upstream | 1146049 | 24533004 ~ 24533544 (-) |
