G956728 (LOC106613263)


Basic Information

Item Value
gene id G956728
gene name LOC106613263
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23665288 ~ 23665930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090807
gaacgttctccacggcctctccagactctgtcacatctgtcacgtgctcagtgtgaacctgctttcatctgtgaagagcacagggcgaatttgccaatcttggtgttctctggcaaatgccaaacgtcctgcatggtgttgggctgtaagcacaacccgcacctgtggacgtcgggccctcataccaccctcatggagtctgtttctgaccgtttgagcagacacatgcacatttgtggcctgctggaggtcattttgcagggctctggcagtgctcctcctgctcctccttgcacaaaggtggaggtagcggtcctgctgctgggttgttgccctcctacggcctcttccacgtctcctgatgtactggcctgtctcctggtagcgcctccatgctctggacactacgctgacagacacagcaaaccttcttgccacagctcggattgatgttccatcctggatgagctgcactacctgagccacttgtgtgggttgtagactacgtctcatgctaccactagagtgaaagcactgccagcattcaaaagtgaccaaaacatcagccaggaagcataggaactgagaagtggtctgtggtcaccacctgcagaaccacttctttattgggggtgtcttgcta

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090807 True 643 TUCP 0.54 1 23665288 23665930

Neighbor

gene id symbol gene type direction distance location
LOC110535501 LOC106578509 coding upstream 3763 23635899 ~ 23661525 (+)
palmdb LOC106578510 coding upstream 60371 23563675 ~ 23604917 (+)
LOC118936499 LOC106578510 coding upstream 71274 23590839 ~ 23594014 (+)
LOC110535500 LOC106578508 coding upstream 133934 23494909 ~ 23531354 (+)
LOC118937334 NA coding upstream 188138 23475135 ~ 23477150 (+)
LOC110535505 LOC106578511 coding downstream 792 23666722 ~ 23675483 (+)
eif1b LOC106578512 coding downstream 9654 23675584 ~ 23678294 (+)
itprid1 LOC106578515 coding downstream 57283 23723213 ~ 23747923 (+)
ppp1r17 ppp1r17 coding downstream 97098 23763028 ~ 23765913 (+)
trdmt1 trdmt1 coding downstream 311418 23977348 ~ 23996262 (+)
G956682 NA non-coding upstream 120560 23544494 ~ 23544728 (+)
G956657 NA non-coding upstream 171842 23493072 ~ 23493446 (+)
G956597 NA non-coding upstream 248999 23412325 ~ 23416289 (+)
LOC110535498 NA non-coding upstream 277387 23381529 ~ 23387901 (+)
G956569 NA non-coding upstream 294725 23370317 ~ 23370563 (+)
G956732 NA non-coding downstream 12150 23678080 ~ 23681424 (+)
G956739 NA non-coding downstream 22345 23688275 ~ 23688480 (+)
G956744 NA non-coding downstream 31849 23697779 ~ 23698068 (+)
G956771 NA non-coding downstream 61167 23727097 ~ 23727416 (+)
G956772 NA non-coding downstream 62400 23728330 ~ 23728626 (+)
tlcd4a LOC106570700 other upstream 924041 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 3895935 19740565 ~ 19799150 (+)
G951511 NA other upstream 4538203 19126665 ~ 19127085 (+)
G948710 NA other upstream 7063396 16554200 ~ 16601892 (+)
LOC110535387 LOC106579475 other upstream 7119999 16543682 ~ 16565783 (+)
G956797 NA other downstream 109842 23775772 ~ 23776845 (+)
G957942 NA other downstream 934541 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1128670 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3047695 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 3262746 26928676 ~ 26929027 (+)

Expression


Co-expression Network