G956744


Basic Information

Item Value
gene id G956744
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23697779 ~ 23698068 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090823
taacatccctgagcagtttccttcctgtcctacagctcagttcagaaggacgactgtatctttgttgtgtctgggtggtttaatacatcctCCACAGCATAGTTATTAACTTGACCAAGCTTAAAGAGATAtgcaatgtctgatttgttaatgttactcatctaccaatcactgcccttctttatgaggtGTTGAAAAGCTCCCGGGTCTTTGTATTTGGATCTGCTTGAAATTCAAtgtttgactgagggaccttacagatgttgtatctatgggggacagaggaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090823 True 290 lncRNA 0.42 1 23697779 23698068

Neighbor

gene id symbol gene type direction distance location
eif1b LOC106578512 coding upstream 19485 23675584 ~ 23678294 (+)
LOC110535505 LOC106578511 coding upstream 22296 23666722 ~ 23675483 (+)
LOC110535501 LOC106578509 coding upstream 36254 23635899 ~ 23661525 (+)
palmdb LOC106578510 coding upstream 92862 23563675 ~ 23604917 (+)
itprid1 LOC106578515 coding downstream 25145 23723213 ~ 23747923 (+)
ppp1r17 ppp1r17 coding downstream 64960 23763028 ~ 23765913 (+)
trdmt1 trdmt1 coding downstream 279280 23977348 ~ 23996262 (+)
cubn cubn coding downstream 298520 23996588 ~ 24049588 (+)
rsu1 rsu1 coding downstream 360656 24058724 ~ 24094985 (+)
G956739 NA non-coding upstream 9299 23688275 ~ 23688480 (+)
G956732 NA non-coding upstream 16355 23678080 ~ 23681424 (+)
G956682 NA non-coding upstream 153051 23544494 ~ 23544728 (+)
G956657 NA non-coding upstream 204333 23493072 ~ 23493446 (+)
G956597 NA non-coding upstream 281490 23412325 ~ 23416289 (+)
G956771 NA non-coding downstream 29029 23727097 ~ 23727416 (+)
G956772 NA non-coding downstream 30262 23728330 ~ 23728626 (+)
G956777 NA non-coding downstream 42673 23740741 ~ 23740964 (+)
G956781 NA non-coding downstream 51942 23750010 ~ 23750258 (+)
G956783 NA non-coding downstream 53794 23751862 ~ 23752291 (+)
G956728 LOC106613263 other upstream 31849 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 956532 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 3928426 19740565 ~ 19799150 (+)
G951511 NA other upstream 4570694 19126665 ~ 19127085 (+)
G948710 NA other upstream 7095887 16554200 ~ 16601892 (+)
G956797 NA other downstream 77704 23775772 ~ 23776845 (+)
G957942 NA other downstream 902403 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1096532 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 3015557 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 3230608 26928676 ~ 26929027 (+)

Expression


Co-expression Network