G956777


Basic Information

Item Value
gene id G956777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23740741 ~ 23740964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090857
ggatttcatgtaatggacatacaaaatagtccaaattggtgaagtgaaataaaaaaaaacaggaaagtGGTACGTGCATAtgttttcaccccctttgctatgaagcccctaaatgatatttggtgcaaccaattacctgcATAAGTCACATAactagttagattgcacacatgtGGACTTTAAGTGTCacgtgatctgtcacatgatctcagtatataaacacc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090857 True 224 lncRNA 0.37 1 23740741 23740964

Neighbor

gene id symbol gene type direction distance location
eif1b LOC106578512 coding upstream 62447 23675584 ~ 23678294 (+)
LOC110535505 LOC106578511 coding upstream 65258 23666722 ~ 23675483 (+)
LOC110535501 LOC106578509 coding upstream 79216 23635899 ~ 23661525 (+)
palmdb LOC106578510 coding upstream 135824 23563675 ~ 23604917 (+)
ppp1r17 ppp1r17 coding downstream 22064 23763028 ~ 23765913 (+)
trdmt1 trdmt1 coding downstream 236384 23977348 ~ 23996262 (+)
cubn cubn coding downstream 255624 23996588 ~ 24049588 (+)
rsu1 rsu1 coding downstream 317760 24058724 ~ 24094985 (+)
c1ql3a c1ql3 coding downstream 356126 24097090 ~ 24103710 (+)
G956772 NA non-coding upstream 12115 23728330 ~ 23728626 (+)
G956771 NA non-coding upstream 13325 23727097 ~ 23727416 (+)
G956744 NA non-coding upstream 42673 23697779 ~ 23698068 (+)
G956739 NA non-coding upstream 52261 23688275 ~ 23688480 (+)
G956732 NA non-coding upstream 59317 23678080 ~ 23681424 (+)
G956781 NA non-coding downstream 9046 23750010 ~ 23750258 (+)
G956783 NA non-coding downstream 10898 23751862 ~ 23752291 (+)
G956785 NA non-coding downstream 12312 23753276 ~ 23753502 (+)
G956792 NA non-coding downstream 20796 23761760 ~ 23762039 (+)
G956795 NA non-coding downstream 27074 23768038 ~ 23768562 (+)
G956728 LOC106613263 other upstream 74811 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 999494 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 3971388 19740565 ~ 19799150 (+)
G951511 NA other upstream 4613656 19126665 ~ 19127085 (+)
G948710 NA other upstream 7138849 16554200 ~ 16601892 (+)
G956797 NA other downstream 34808 23775772 ~ 23776845 (+)
G957942 NA other downstream 859507 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1053636 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2972661 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 3187712 26928676 ~ 26929027 (+)

Expression


Co-expression Network