Gene
RNA
| Item | Value |
|---|---|
| gene id | G956797 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23775772 ~ 23776845 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1090885 | True | 533 | TUCP | 0.49 | 2 | 23775772 | 23776845 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r17 | ppp1r17 | coding | upstream | 9859 | 23763028 ~ 23765913 (+) |
| itprid1 | LOC106578515 | coding | upstream | 27849 | 23723213 ~ 23747923 (+) |
| eif1b | LOC106578512 | coding | upstream | 97478 | 23675584 ~ 23678294 (+) |
| LOC110535505 | LOC106578511 | coding | upstream | 100289 | 23666722 ~ 23675483 (+) |
| LOC110535501 | LOC106578509 | coding | upstream | 114247 | 23635899 ~ 23661525 (+) |
| trdmt1 | trdmt1 | coding | downstream | 200503 | 23977348 ~ 23996262 (+) |
| cubn | cubn | coding | downstream | 219743 | 23996588 ~ 24049588 (+) |
| rsu1 | rsu1 | coding | downstream | 281879 | 24058724 ~ 24094985 (+) |
| c1ql3a | c1ql3 | coding | downstream | 320245 | 24097090 ~ 24103710 (+) |
| dtx3l1 | LOC106578522 | coding | downstream | 369631 | 24146476 ~ 24149671 (+) |
| G956796 | NA | non-coding | upstream | 91 | 23775473 ~ 23775681 (+) |
| G956795 | NA | non-coding | upstream | 7210 | 23768038 ~ 23768562 (+) |
| G956792 | NA | non-coding | upstream | 13733 | 23761760 ~ 23762039 (+) |
| G956785 | NA | non-coding | upstream | 22270 | 23753276 ~ 23753502 (+) |
| G956783 | NA | non-coding | upstream | 23481 | 23751862 ~ 23752291 (+) |
| G956798 | NA | non-coding | downstream | 468 | 23777313 ~ 23777694 (+) |
| G956799 | NA | non-coding | downstream | 1063 | 23777908 ~ 23778122 (+) |
| G956800 | NA | non-coding | downstream | 2035 | 23778880 ~ 23779171 (+) |
| G956803 | NA | non-coding | downstream | 4266 | 23781111 ~ 23781371 (+) |
| G956811 | NA | non-coding | downstream | 13529 | 23790374 ~ 23790686 (+) |
| G956728 | LOC106613263 | other | upstream | 109842 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1034525 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4006419 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4648687 | 19126665 ~ 19127085 (+) |
| G948710 | NA | other | upstream | 7173880 | 16554200 ~ 16601892 (+) |
| G957942 | NA | other | downstream | 823626 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 1017755 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2936780 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 3151831 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3632157 | 27409002 ~ 27412913 (+) |
