G956803


Basic Information

Item Value
gene id G956803
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23781111 ~ 23781371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090892
ggagtaaaggtgtggGGATTTTCCCCTCTGGCTGCACATACAATATGcagatagaaatgaggtaaaacggatttaagttaccatgcattaaagtccccggccactaggagcgccgcctctggatgagcattttcttctttgcttatgtcttatacagctcgttgagtgcagtcttagtgccagcatcgttttgtggtggtaaatagacagctatgaaaaatattaatgaaaagtctcttggtaaatagtgtggtctacagc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090892 True 261 lncRNA 0.43 1 23781111 23781371

Neighbor

gene id symbol gene type direction distance location
ppp1r17 ppp1r17 coding upstream 15198 23763028 ~ 23765913 (+)
itprid1 LOC106578515 coding upstream 33188 23723213 ~ 23747923 (+)
eif1b LOC106578512 coding upstream 102817 23675584 ~ 23678294 (+)
LOC110535505 LOC106578511 coding upstream 105628 23666722 ~ 23675483 (+)
LOC110535501 LOC106578509 coding upstream 119586 23635899 ~ 23661525 (+)
trdmt1 trdmt1 coding downstream 195977 23977348 ~ 23996262 (+)
cubn cubn coding downstream 215217 23996588 ~ 24049588 (+)
rsu1 rsu1 coding downstream 277353 24058724 ~ 24094985 (+)
c1ql3a c1ql3 coding downstream 315719 24097090 ~ 24103710 (+)
dtx3l1 LOC106578522 coding downstream 365105 24146476 ~ 24149671 (+)
G956800 NA non-coding upstream 1940 23778880 ~ 23779171 (+)
G956799 NA non-coding upstream 2989 23777908 ~ 23778122 (+)
G956798 NA non-coding upstream 3417 23777313 ~ 23777694 (+)
G956796 NA non-coding upstream 5430 23775473 ~ 23775681 (+)
G956795 NA non-coding upstream 12549 23768038 ~ 23768562 (+)
G956811 NA non-coding downstream 9003 23790374 ~ 23790686 (+)
G956812 NA non-coding downstream 9764 23791135 ~ 23791396 (+)
G956819 NA non-coding downstream 20830 23802201 ~ 23802459 (+)
G956820 NA non-coding downstream 21682 23803053 ~ 23803269 (+)
G956822 NA non-coding downstream 26356 23807727 ~ 23807953 (+)
G956797 NA other upstream 4266 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 115181 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1039864 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4011758 19740565 ~ 19799150 (+)
G951511 NA other upstream 4654026 19126665 ~ 19127085 (+)
G957942 NA other downstream 819100 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1013229 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2932254 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 3147305 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 3627631 27409002 ~ 27412913 (+)

Expression


Co-expression Network