G956811


Basic Information

Item Value
gene id G956811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 23790374 ~ 23790686 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1090900
gattgcacattggccaacAGAACGGATGGTAGTGGAGGTTTACTCACTCTTgtatgaattctcagaaggcagcccgacctctGCCCACTTTTTccccgtcttttcttcacgcaaatgactgGGATTTGGGCCCGTTCACGTCGGACTTGTTAAAGAAAAGCTCTtcgtccagttcaaggtgagtaatcgttgttctgatgtccagaagttattttcgtcataagagatggtagcaggaacattatgtacaaaataaataacaaacaacgcaaaaaactAACagaatagcacagttggttaggagcccgtaaaa

Function

NR:

description
PREDICTED: retinoblastoma-like protein 2 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1090900 True 313 lncRNA 0.43 1 23790374 23790686

Neighbor

gene id symbol gene type direction distance location
ppp1r17 ppp1r17 coding upstream 24461 23763028 ~ 23765913 (+)
itprid1 LOC106578515 coding upstream 42451 23723213 ~ 23747923 (+)
eif1b LOC106578512 coding upstream 112080 23675584 ~ 23678294 (+)
LOC110535505 LOC106578511 coding upstream 114891 23666722 ~ 23675483 (+)
LOC110535501 LOC106578509 coding upstream 128849 23635899 ~ 23661525 (+)
trdmt1 trdmt1 coding downstream 186662 23977348 ~ 23996262 (+)
cubn cubn coding downstream 205902 23996588 ~ 24049588 (+)
rsu1 rsu1 coding downstream 268038 24058724 ~ 24094985 (+)
c1ql3a c1ql3 coding downstream 306404 24097090 ~ 24103710 (+)
dtx3l1 LOC106578522 coding downstream 355790 24146476 ~ 24149671 (+)
G956803 NA non-coding upstream 9003 23781111 ~ 23781371 (+)
G956800 NA non-coding upstream 11203 23778880 ~ 23779171 (+)
G956799 NA non-coding upstream 12252 23777908 ~ 23778122 (+)
G956798 NA non-coding upstream 12680 23777313 ~ 23777694 (+)
G956796 NA non-coding upstream 14693 23775473 ~ 23775681 (+)
G956812 NA non-coding downstream 449 23791135 ~ 23791396 (+)
G956819 NA non-coding downstream 11515 23802201 ~ 23802459 (+)
G956820 NA non-coding downstream 12367 23803053 ~ 23803269 (+)
G956822 NA non-coding downstream 17041 23807727 ~ 23807953 (+)
G956824 LOC108280739 non-coding downstream 20935 23811621 ~ 23812097 (+)
G956797 NA other upstream 13529 23775772 ~ 23776845 (+)
G956728 LOC106613263 other upstream 124444 23665288 ~ 23665930 (+)
tlcd4a LOC106570700 other upstream 1049127 22712577 ~ 22741263 (+)
phldb2b tcpe other upstream 4021021 19740565 ~ 19799150 (+)
G951511 NA other upstream 4663289 19126665 ~ 19127085 (+)
G957942 NA other downstream 809785 24600471 ~ 24601653 (+)
G958300 idi1 other downstream 1003914 24794600 ~ 24795736 (+)
G960696 LOC106583976 other downstream 2922939 26713625 ~ 26797294 (+)
G960816 armc4 other downstream 3137990 26928676 ~ 26929027 (+)
bambia LOC106578551 other downstream 3618316 27409002 ~ 27412913 (+)

Expression


Co-expression Network