Gene
RNA
| Item | Value |
|---|---|
| gene id | G956820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 23803053 ~ 23803269 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1090909 | True | 217 | lncRNA | 0.42 | 1 | 23803053 | 23803269 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp1r17 | ppp1r17 | coding | upstream | 37140 | 23763028 ~ 23765913 (+) |
| itprid1 | LOC106578515 | coding | upstream | 55130 | 23723213 ~ 23747923 (+) |
| eif1b | LOC106578512 | coding | upstream | 124759 | 23675584 ~ 23678294 (+) |
| LOC110535505 | LOC106578511 | coding | upstream | 127570 | 23666722 ~ 23675483 (+) |
| LOC110535501 | LOC106578509 | coding | upstream | 141528 | 23635899 ~ 23661525 (+) |
| trdmt1 | trdmt1 | coding | downstream | 174079 | 23977348 ~ 23996262 (+) |
| cubn | cubn | coding | downstream | 193319 | 23996588 ~ 24049588 (+) |
| rsu1 | rsu1 | coding | downstream | 255455 | 24058724 ~ 24094985 (+) |
| c1ql3a | c1ql3 | coding | downstream | 293821 | 24097090 ~ 24103710 (+) |
| dtx3l1 | LOC106578522 | coding | downstream | 343207 | 24146476 ~ 24149671 (+) |
| G956819 | NA | non-coding | upstream | 594 | 23802201 ~ 23802459 (+) |
| G956812 | NA | non-coding | upstream | 11657 | 23791135 ~ 23791396 (+) |
| G956811 | NA | non-coding | upstream | 12367 | 23790374 ~ 23790686 (+) |
| G956803 | NA | non-coding | upstream | 21682 | 23781111 ~ 23781371 (+) |
| G956800 | NA | non-coding | upstream | 23882 | 23778880 ~ 23779171 (+) |
| G956822 | NA | non-coding | downstream | 4458 | 23807727 ~ 23807953 (+) |
| G956824 | LOC108280739 | non-coding | downstream | 8352 | 23811621 ~ 23812097 (+) |
| G956839 | NA | non-coding | downstream | 23962 | 23827231 ~ 23827730 (+) |
| G956856 | NA | non-coding | downstream | 56000 | 23859269 ~ 23859787 (+) |
| G956862 | NA | non-coding | downstream | 64384 | 23867653 ~ 23867897 (+) |
| G956797 | NA | other | upstream | 26208 | 23775772 ~ 23776845 (+) |
| G956728 | LOC106613263 | other | upstream | 137123 | 23665288 ~ 23665930 (+) |
| tlcd4a | LOC106570700 | other | upstream | 1061806 | 22712577 ~ 22741263 (+) |
| phldb2b | tcpe | other | upstream | 4033700 | 19740565 ~ 19799150 (+) |
| G951511 | NA | other | upstream | 4675968 | 19126665 ~ 19127085 (+) |
| G957942 | NA | other | downstream | 797202 | 24600471 ~ 24601653 (+) |
| G958300 | idi1 | other | downstream | 991331 | 24794600 ~ 24795736 (+) |
| G960696 | LOC106583976 | other | downstream | 2910356 | 26713625 ~ 26797294 (+) |
| G960816 | armc4 | other | downstream | 3125407 | 26928676 ~ 26929027 (+) |
| bambia | LOC106578551 | other | downstream | 3605733 | 27409002 ~ 27412913 (+) |
